RNAquarium Metadata Server
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contig_metadata

26 rows where bioproject = "PRJNA688931", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 26 ✖

tax_phylum 1

  • Chloroflexota · 26 ✖

tax_kingdom 1

bioproject 1

  • PRJNA688931 · 26 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1944530 1944530 PRJNA688931_P_NODE_29482_length_187_cov_1.434783_g29269_i0 PRJNA688931 29482 187 1.434783 2.68304421 Roseiflexus sp. RS-1 357808 Bacteria Bacteria 84.2 5.68e-12   NTclustered gi|470481958|ref|NR_076505.1| 357808 g29269 i0 81.553 1.6524064171123 103 17 55 1 83 185 294 194 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 309 84.2 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
5006405 5006405 PRJNA688931_P_NODE_32944_length_175_cov_2.253968_g32731_i0 PRJNA688931 32944 175 2.253968 3.944444 Chloroflexus 1107 Bacteria Bacteria 176 8.38e-40   NTclustered gi|470483916|ref|NR_076619.1| 152260 g32731 i0 85.714 85.7428571428571 168 22 95 2 9 175 665 831 Chloroflexus aggregans strain MD-66 23S ribosomal RNA gene, complete sequence blastn 15005 176 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae Chloroflexus Chloroflexus aggregans
12147991 12147991 PRJNA688931_P_NODE_8470_length_368_cov_3.479624_g8257_i0 PRJNA688931 8470 368 3.479624 12.80501632 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 169 2.51e-51   NR MDO9333994.1 2026733 g8257 i0 94.6 0.75 92 4 74.2 1 367 95 48 139 MDO9333994.1 30S ribosomal protein S4 [Dehalococcoidales bacterium] diamond 276 169 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
14697386 14697386 PRJNA688931_P_NODE_20392_length_227_cov_0.870787_g20179_i0 PRJNA688931 20392 227 0.870787 1.97668649 Roseiflexus sp. RS-1 357808 Bacteria Bacteria 200 6.819999999999998e-47   NTclustered gi|470481958|ref|NR_076505.1| 357808 g20179 i0 83.478 8.14537444933921 230 22 100 11 1 227 1137 1353 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 1849 200 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
14697397 14697397 PRJNA688931_P_NODE_21612_length_220_cov_1.473684_g21399_i0 PRJNA688931 21612 220 1.473684 3.2421048 Thermosporothrix sp. COM3 2490863 Bacteria Bacteria 272 1.37e-68   NTclustered gi|1606557374|dbj|AP019376.1| 2490863 g21399 i0 89.189 162.872727272727 222 18 99 5 3 220 5333811 5333592 Thermosporothrix sp. COM3 DNA, nearly complete genome blastn 35832 272 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Thermosporotrichaceae Thermosporothrix Thermosporothrix sp. COM3
22345880 22345880 PRJNA688931_P_NODE_29898_length_185_cov_3.455882_g29685_i0 PRJNA688931 29898 185 3.455882 6.3933817 Herpetosiphon aurantiacus 65 Bacteria Bacteria 139 1.18e-28   NTclustered gi|159889572|gb|CP000875.1| 316274 g29685 i0 81.006 0.967567567567568 179 31 96 3 1 178 4626783 4626959 Herpetosiphon aurantiacus DSM 785, complete genome blastn 179 139 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae Herpetosiphon Herpetosiphon aurantiacus
27019029 27019029 PRJNA688931_P_NODE_2462_length_727_cov_3.163717_g2293_i0 PRJNA688931 2462 727 3.163717 23.00022259 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 57.8 6.64e-6   NR MPZ48756.1 2026734 g2293 i0 31 2.34387895460798 187 118 77.2 4 603 43 66 241 MPZ48756.1 aquaporin [Dehalococcoidia bacterium] diamond 1704 57.8 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
27283509 27283509 PRJNA688931_P_NODE_2003_length_800_cov_2.840213_g1846_i0 PRJNA688931 2003 800 2.840213 22.721704 Bacteria 2 Bacteria Bacteria 48.1 0.0134   NR NLF66045.1 2026724 g1846 i0 28.7 1.12125 101 70 37.5 2 436 137 51 150 NLF66045.1 hypothetical protein [Chloroflexota bacterium] diamond 897 48.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27398479 27398479 PRJNA688931_P_NODE_2083_length_785_cov_3.548913_g1925_i0 PRJNA688931 2083 785 3.548913 27.85896705 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 150 1.07e-40   NR MCK9486999.1 2026734 g1925 i0 39.6 1.6968152866242 227 129 86 4 16 690 4 224 MCK9486999.1 aquaporin [Dehalococcoidia bacterium] diamond 1332 150 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
27524663 27524663 PRJNA688931_P_NODE_34783_length_170_cov_1.256198_g34570_i0 PRJNA688931 34783 170 1.256198 2.1355366 Anaerolineales bacterium HSG24 3055600 Bacteria Bacteria 45.1 0.00214   NR MDM8527564.1 3055600 g34570 i0 45.6 1.00588235294118 57 29 97.1 1 170 6 604 660 MDM8527564.1 response regulator [Anaerolineales bacterium HSG24] diamond 171 45.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium HSG24
28282201 28282201 PRJNA688931_P_NODE_18166_length_241_cov_0.916667_g17953_i0 PRJNA688931 18166 241 0.916667 2.20916747 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 85.9 5.65e-18   NR MEX2229091.1 2026734 g17953 i0 65.3 1.92946058091286 49 17 61 0 1 147 217 265 MEX2229091.1 MIP/aquaporin family protein [Dehalococcoidia bacterium] diamond 465 85.9 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
28345549 28345549 PRJNA688931_P_NODE_25526_length_202_cov_1.464052_g25313_i0 PRJNA688931 25526 202 1.464052 2.95738504 Chloroflexota bacterium 2026724 Bacteria Bacteria 42 0.0413   NR MDE2885761.1 2026724 g25313 i0 34 0.742574257425743 50 27 74.3 1 195 46 456 499 MDE2885761.1 trypsin-like peptidase domain-containing protein [Chloroflexota bacterium] diamond 150 42 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28440458 28440458 PRJNA688931_P_NODE_5966_length_450_cov_1.698254_g5754_i0 PRJNA688931 5966 450 1.698254 7.642143 Chloroflexota bacterium 2026724 Bacteria Bacteria 94 4.91e-19   NR TMG21631.1 2026724 g5754 i0 46.2 1.04 156 76 100 5 450 1 581 734 TMG21631.1 MAG: tandem-95 repeat protein [Chloroflexota bacterium] diamond 468 94 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28472033 28472033 PRJNA688931_P_NODE_8126_length_377_cov_3.033537_g7913_i0 PRJNA688931 8126 377 3.033537 11.43643449 Anaerolineales bacterium 2073117 Bacteria Bacteria 69.3 2.5e-11   NR MCL4272608.1 2073117 g7913 i0 40.2 1.30503978779841 82 45 65.3 1 246 1 2 79 MCL4272608.1 aquaporin [Anaerolineales bacterium] diamond 492 69.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
28546813 28546813 PRJNA688931_P_NODE_26087_length_200_cov_1.172185_g25874_i0 PRJNA688931 26087 200 1.172185 2.34437 PVC group 1783257 Bacteria Bacteria 55.5 6.48e-7   NR MCI0710930.1 2026724 g25874 i0 40.9 7.665 66 38 99 1 198 1 88 152 MCI0710930.1 zinc-binding dehydrogenase [Chloroflexota bacterium] diamond 1533 55.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28925319 28925319 PRJNA688931_P_NODE_28128_length_192_cov_1.090909_g27915_i0 PRJNA688931 28128 192 1.090909 2.09454528 Bacteria 2 Bacteria Bacteria 72.8 3.11e-13   NR HET9199509.1 2026734 g27915 i0 52.4 5.890625 63 30 98.4 0 3 191 242 304 HET9199509.1 D-2-hydroxyacid dehydrogenase [Dehalococcoidia bacterium] diamond 1131 73.2 0.994535519125683 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
29418976 29418976 PRJNA688931_P_NODE_34669_length_170_cov_1.677686_g34456_i0 PRJNA688931 34669 170 1.677686 2.8520662 Anaerolineae bacterium 2052143 Bacteria Bacteria 42 0.0266   NR MDH4137170.1 2052143 g34456 i0 40.4 0.829411764705882 47 28 82.9 0 149 9 192 238 MDH4137170.1 cellobiose phosphorylase [Anaerolineae bacterium] diamond 141 42 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29545283 29545283 PRJNA688931_P_NODE_35750_length_168_cov_1.310924_g35537_i0 PRJNA688931 35750 168 1.310924 2.20235232 Anaerolineales bacterium 2073117 Bacteria Bacteria 76.3 2.87e-15   NR MCB0009405.1 2073117 g35537 i0 60.4 0.946428571428571 53 20 92.9 1 1 156 91 143 MCB0009405.1 metallophosphatase domain-containing protein [Anaerolineales bacterium] diamond 159 76.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29556769 29556769 PRJNA688931_P_NODE_19090_length_235_cov_0.833333_g18877_i0 PRJNA688931 19090 235 0.833333 1.95833255 FCB group 1783270 Bacteria Bacteria 60.8 2.73e-9   NR MFN2285900.1 2052143 g18877 i0 50 2.59148936170213 46 23 58.7 0 164 27 36 81 MFN2285900.1 leucine-rich repeat domain-containing protein [Anaerolineae bacterium] diamond 609 61.2 0.993464052287582 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
30367119 30367119 PRJNA688931_P_NODE_9912_length_336_cov_2.285714_g9699_i0 PRJNA688931 9912 336 2.285714 7.67999904 Herpetosiphon llansteffanensis 2094568 Bacteria Bacteria 100 4.6199999999999997e-23   NR WP_205701354.1 2094568 g9699 i0 58.7 0.821428571428571 92 37 82.1 1 59 334 156 246 WP_205701354.1 peptidoglycan-binding domain-containing protein [Herpetosiphon llansteffanensis] diamond 276 100 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae Herpetosiphon Herpetosiphon llansteffanensis
30808985 30808985 PRJNA688931_P_NODE_16114_length_256_cov_1.560386_g15901_i0 PRJNA688931 16114 256 1.560386 3.99458816 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 41.2 0.0486   NR MFA7296954.1 2026734 g15901 i0 43.4 0.62109375 53 22 56.3 3 80 223 56 105 MFA7296954.1 metal-sensitive transcriptional regulator [Dehalococcoidia bacterium] diamond 159 41.2 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
31062006 31062006 PRJNA688931_P_NODE_14335_length_273_cov_1.727679_g14122_i0 PRJNA688931 14335 273 1.727679 4.71656367 Anaerolineae bacterium 2052143 Bacteria Bacteria 61.2 1.33e-8   NR MFN8447328.1 2052143 g14122 i0 40.3 1.52747252747253 72 43 79.1 0 268 53 241 312 MFN8447328.1 FAD-dependent oxidoreductase [Anaerolineae bacterium] diamond 417 61.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31262884 31262884 PRJNA688931_P_NODE_26335_length_199_cov_1.040000_g26122_i0 PRJNA688931 26335 199 1.04 2.0696 Bacteria candidate phyla 1783234 Bacteria Bacteria 55.5 6.86e-7   NR MSP78358.1 2026734 g26122 i0 48.1 20.9698492462312 54 28 81.4 0 7 168 438 491 MSP78358.1 elongation factor G [Dehalococcoidia bacterium] diamond 4173 55.5 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
32263981 32263981 PRJNA688931_P_NODE_7438_length_398_cov_1.730659_g7225_i0 PRJNA688931 7438 398 1.730659 6.88802282 Chloroflexales bacterium 2725990 Bacteria Bacteria 54.3 1.79e-5   NR NTU82595.1 2725990 g7225 i0 31.9 3.33165829145729 116 72 87.4 1 51 398 21 129 NTU82595.1 VWA domain-containing protein [Chloroflexales bacterium] diamond 1326 54.3 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales     Chloroflexales bacterium
32421887 32421887 PRJNA688931_P_NODE_26619_length_198_cov_1.033557_g26406_i0 PRJNA688931 26619 198 1.033557 2.04644286 Anaerolineales bacterium 2073117 Bacteria Bacteria 55.1 5.31e-7   NR MFN2194855.1 2073117 g26406 i0 45.8 0.893939393939394 59 32 89.4 0 192 16 27 85 MFN2194855.1 histidine phosphatase family protein [Anaerolineales bacterium] diamond 177 55.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32894737 32894737 PRJNA688931_P_NODE_19100_length_234_cov_4.156757_g18887_i0 PRJNA688931 19100 234 4.156757 9.72681138 Chloroflexota bacterium 2026724 Bacteria Bacteria 58.2 6.45e-8   NR HLH71787.1 2026724 g18887 i0 40.3 0.987179487179487 77 44 98.7 1 2 232 9 83 HLH71787.1 aquaporin [Chloroflexota bacterium] diamond 231 58.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;