RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA688931" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688931 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4496611 4496611 PRJNA688931_P_NODE_36784_length_167_cov_1.322034_g36571_i0 PRJNA688931 36784 167 1.322034 2.20779678 uncultured Chlamydiales bacterium 174324 Bacteria Bacteria 215 1.69e-51   NTclustered gi|2874253688|emb|OY969414.1| 174324 g36571 i0 89.82 98.4910179640719 167 17 100 0 1 167 2364418 2364252 MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 blastn 16448 215 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     uncultured Chlamydiales bacterium
29493772 29493772 PRJNA688931_P_NODE_18310_length_240_cov_1.073298_g18097_i0 PRJNA688931 18310 240 1.073298 2.5759152 Pseudomonadati 3379134 Bacteria Bacteria 51.2 2.84e-5   NR OJV08638.1 1895743 g18097 i0 42.1 4.25 76 25 95 2 6 233 135 191 OJV08638.1 MAG: hypothetical protein BGO14_06515 [Chlamydiales bacterium 38-26] diamond 1020 51.6 0.992248062015504 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium 38-26

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;