RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA688931" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA688931 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7047098 7047098 PRJNA688931_P_NODE_26206_length_199_cov_1.826667_g25993_i0 PRJNA688931 26206 199 1.826667 3.63506733 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 98.6 6.48e-24   NR MEJ5169988.1 2682145 g25993 i0 69.7 0.994974874371859 66 19 98 1 3 197 98 163 MEJ5169988.1 glutathione peroxidase [Fimbriimonadales bacterium] diamond 198 98.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
27398523 27398523 PRJNA688931_P_NODE_7303_length_402_cov_2.515581_g7090_i0 PRJNA688931 7303 402 2.515581 10.11263562 Armatimonadota bacterium 2033014 Bacteria Bacteria 65.5 8.97e-10   NR MBI3911130.1 2033014 g7090 i0 34.8 0.835820895522388 112 68 83.6 1 347 12 12 118 MBI3911130.1 aquaporin [Armatimonadota bacterium] diamond 336 65.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27946650 27946650 PRJNA688931_P_NODE_39745_length_165_cov_0.887931_g39532_i0 PRJNA688931 39745 165 0.887931 1.46508615 PVC group 1783257 Bacteria Bacteria 51.2 1.3e-5   NR MBS1718041.1 2033014 g39532 i0 55.1 3.52727272727273 49 21 87.3 1 151 8 26 74 MBS1718041.1 hypothetical protein [Armatimonadota bacterium] diamond 582 51.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28977228 28977228 PRJNA688931_P_NODE_38088_length_166_cov_1.025641_g37875_i0 PRJNA688931 38088 166 1.025641 1.70256406 Armatimonadota bacterium 2033014 Bacteria Bacteria 41.6 0.0349   NR MFO7946331.1 2033014 g37875 i0 37 0.975903614457831 54 34 97.6 0 166 5 447 500 MFO7946331.1 chondroitinase family polysaccharide lyase [Armatimonadota bacterium] diamond 162 41.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;