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contig_metadata

25 rows where bioproject = "PRJNA688931", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 25 ✖

tax_kingdom 1

  • Pseudomonadati · 25 ✖

bioproject 1

  • PRJNA688931 · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5006390 5006390 PRJNA688931_P_NODE_24264_length_208_cov_0.955975_g24051_i0 PRJNA688931 24264 208 0.955975 1.988428 Geomonas 2651583 Bacteria Bacteria 331 2.0900000000000002e-86   NTclustered gi|2233265061|gb|CP096574.1| 2740185 g24051 i0 95.261 196.745192307692 211 7 100 2 1 208 885209 885419 Geomonas paludis strain RG22 chromosome, complete genome blastn 40923 331 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geomonas Geomonas paludis
8321747 8321747 PRJNA688931_P_NODE_41967_length_163_cov_0.912281_g41754_i0 PRJNA688931 41967 163 0.912281 1.48701803 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 195 2.13e-45   NTclustered gi|2893358420|emb|OZ220712.1| 2202153 g41754 i0 88.415 173 164 16 99 3 1 162 1711983 1711821 MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1 blastn 28199 195 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
20304449 20304449 PRJNA688931_P_NODE_22296_length_217_cov_0.970238_g22083_i0 PRJNA688931 22296 217 0.970238 2.10541646 Geotalea 2910589 Bacteria Bacteria 298 2.23e-76   NTclustered gi|221562406|gb|CP001390.1| 316067 g22083 i0 93.564 212.175115207373 202 9 92 3 1 200 2114849 2114650 Geobacter daltonii FRC-32, complete genome blastn 46042 298 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geotalea Geotalea daltonii
25404592 25404592 PRJNA688931_P_NODE_42240_length_163_cov_0.903509_g42027_i0 PRJNA688931 42240 163 0.903509 1.47271967 root 1 Root_unresolved Root_unresolved 302 1.22e-77   NTclustered gi|470481184|ref|NR_076459.1| 29543 g42027 i0 100 183.20245398773 163 0 100 0 1 163 994 832 Pelobacter propionicus strain Ott Bd 1 23S ribosomal RNA gene, complete sequence blastn 29862 302 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Pelobacter Pelobacter propionicus
26639123 26639123 PRJNA688931_P_NODE_5041_length_495_cov_1.307175_g4829_i0 PRJNA688931 5041 495 1.307175 6.47051625 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 151 2.47e-39   NR HAO22905.1 2049433 g4829 i0 39.8 1.06666666666667 176 92 98.2 2 6 491 213 388 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 528 151 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
27240222 27240222 PRJNA688931_P_NODE_10903_length_318_cov_4.416357_g10690_i0 PRJNA688931 10903 318 4.416357 14.04401526 Desulfatiglandales bacterium 3024416 Bacteria Bacteria 43.5 0.0397   NR MFO7461411.1 3024416 g10690 i0 30.9 0.886792452830189 94 56 80.2 3 35 289 98 191 MFO7461411.1 cyclic nucleotide-binding domain-containing protein [Desulfatiglandales bacterium] diamond 282 43.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfatiglandales     Desulfatiglandales bacterium
27240234 27240234 PRJNA688931_P_NODE_1983_length_805_cov_3.078042_g1826_i0 PRJNA688931 1983 805 3.078042 24.7782381 Desulfobacter sp. 2294 Bacteria Bacteria 184 3.23e-49   NR MDD9301020.1 2294 g1826 i0 40.3 1.73664596273292 233 137 86.8 1 5 703 566 796 MDD9301020.1 DUF819 family protein [Desulfobacter sp.] diamond 1398 184 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacter Desulfobacter sp.
27430211 27430211 PRJNA688931_P_NODE_39583_length_165_cov_0.896552_g39370_i0 PRJNA688931 39583 165 0.896552 1.4793108 Thermodesulfobacterium sp. TA1 2234087 Bacteria Bacteria 56.6 1.59e-7   NR WP_150071660.1 2234087 g39370 i0 50 3.81818181818182 52 26 94.5 0 8 163 302 353 WP_150071660.1 pyridoxal phosphate-dependent aminotransferase [Thermodesulfobacterium sp. TA1] diamond 630 56.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Thermodesulfobacteria Thermodesulfobacteriales Thermodesulfobacteriaceae Thermodesulfobacterium Thermodesulfobacterium sp. TA1
27777437 27777437 PRJNA688931_P_NODE_4944_length_500_cov_1.505543_g4732_i0 PRJNA688931 4944 500 1.505543 7.527715 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 82 1.12e-14   NR HAO22905.1 2049433 g4732 i0 30.6 0.864 144 97 84.6 1 4 426 411 554 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 432 82 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
28124625 28124625 PRJNA688931_P_NODE_38325_length_166_cov_0.888889_g38112_i0 PRJNA688931 38325 166 0.888889 1.47555574 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 65.9 8.86e-11   NR MEW5733838.1 2202153 g38112 i0 55.8 0.939759036144578 52 23 94 0 9 164 309 360 MEW5733838.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 156 65.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29071996 29071996 PRJNA688931_P_NODE_8_length_3936_cov_8.681760_g7_i0 PRJNA688931 8 3936 8.68176 341.7140736 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 54.7 6.32e-4   NR GJM17643.1 2202153 g7 i0 25.3 0.171493902439024 225 133 16.1 7 1936 1304 10 213 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 675 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29545281 29545281 PRJNA688931_P_NODE_33750_length_173_cov_1.427419_g33537_i0 PRJNA688931 33750 173 1.427419 2.46943487 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 113 5.76e-31   NR KAB2834671.1 2080303 g33537 i0 98.2 0.988439306358382 57 1 98.8 0 2 172 23 79 KAB2834671.1 MAG: ATPase, partial [Candidatus Dadabacteria bacterium] diamond 171 113 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
29829538 29829538 PRJNA688931_P_NODE_40971_length_164_cov_0.895652_g40758_i0 PRJNA688931 40971 164 0.895652 1.46886928 Desulfobulbaceae bacterium 2053307 Bacteria Bacteria 89.7 2.4e-19   NR MCK5195349.1 2053307 g40758 i0 85.2 4.9390243902439 54 8 98.8 0 163 2 7 60 MCK5195349.1 aldehyde dehydrogenase family protein [Desulfobulbaceae bacterium] diamond 810 89.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
29987547 29987547 PRJNA688931_P_NODE_22711_length_215_cov_1.090361_g22498_i0 PRJNA688931 22711 215 1.090361 2.34427615 Desulfobacteraceae bacterium IS3 1934248 Bacteria Bacteria 42.4 0.0355   NR OQX09992.1 1934248 g22498 i0 39.7 0.948837209302326 68 38 94.9 2 4 207 365 429 OQX09992.1 MAG: hypothetical protein BWK80_46230 [Desulfobacteraceae bacterium IS3] diamond 204 42.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium IS3
30220146 30220146 PRJNA688931_P_NODE_21472_length_221_cov_1.197674_g21259_i0 PRJNA688931 21472 221 1.197674 2.64685954 Bacteria 2 Bacteria Bacteria 48.5 2.52e-4   NR OGR10760.1 1797910 g21259 i0 27.9 1.84615384615385 68 49 92.3 0 217 14 312 379 OGR10760.1 MAG: sphingosine-1-phosphate lyase [Desulfobacula sp. GWF2_41_7] diamond 408 48.9 0.991820040899796 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacula Desulfobacula sp. GWF2_41_7
30587703 30587703 PRJNA688931_P_NODE_36813_length_167_cov_1.313559_g36600_i0 PRJNA688931 36813 167 1.313559 2.19364353 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 47 4.25e-4   NR HAO22905.1 2049433 g36600 i0 36.5 0.934131736526946 52 33 93.4 0 158 3 377 428 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 156 47 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
31219419 31219419 PRJNA688931_P_NODE_36655_length_167_cov_1.745763_g36442_i0 PRJNA688931 36655 167 1.745763 2.91542421 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 45.1 0.00101   NR MCA9809949.1 2080303 g36442 i0 68.6 1.92215568862275 35 11 62.9 0 153 49 113 147 MCA9809949.1 3'(2'),5'-bisphosphate nucleotidase [Candidatus Dadabacteria bacterium] diamond 321 45.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
31409580 31409580 PRJNA688931_P_NODE_29476_length_187_cov_1.449275_g29263_i0 PRJNA688931 29476 187 1.449275 2.71014425 Desulfobacterales bacterium 2044940 Bacteria Bacteria 50.8 1.41e-5   NR MDX1707326.1 2044940 g29263 i0 41.5 0.850267379679144 53 31 85 0 186 28 34 86 MDX1707326.1 2-isopropylmalate synthase [Desulfobacterales bacterium] diamond 159 50.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
31757471 31757471 PRJNA688931_P_NODE_8997_length_355_cov_1.339869_g8784_i0 PRJNA688931 8997 355 1.339869 4.75653495 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 57 1.33e-6   NR HAO22905.1 2049433 g8784 i0 33.3 1.84225352112676 108 59 82.8 4 55 348 360 464 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 654 57 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
31788882 31788882 PRJNA688931_P_NODE_4477_length_528_cov_2.459290_g4267_i0 PRJNA688931 4477 528 2.45929 12.9850512 Desulfobulbaceae bacterium 2053307 Bacteria Bacteria 45.8 0.0412   NR MCK5232122.1 2053307 g4267 i0 29.7 0.670454545454545 118 59 61.4 3 479 156 171 274 MCK5232122.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Desulfobulbaceae bacterium] diamond 354 45.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
31820587 31820587 PRJNA688931_P_NODE_4237_length_543_cov_2.987854_g4030_i0 PRJNA688931 4237 543 2.987854 16.22404722 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 172 6.63e-48   NR MCK5313174.1 2049433 g4030 i0 46.9 0.988950276243094 179 94 98.9 1 538 2 130 307 MCK5313174.1 M20/M25/M40 family metallo-hydrolase [Desulfobacteraceae bacterium] diamond 537 172 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
32073820 32073820 PRJNA688931_P_NODE_13638_length_281_cov_1.327586_g13425_i0 PRJNA688931 13638 281 1.327586 3.73051666 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 72 2.94e-12   NR HAO22905.1 2049433 g13425 i0 35.4 0.875444839857651 82 53 87.5 0 258 13 402 483 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 246 72 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
32105390 32105390 PRJNA688931_P_NODE_11938_length_302_cov_2.549407_g11725_i0 PRJNA688931 11938 302 2.549407 7.69920914 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 50.1 1.24e-4   NR GJM17643.1 2202153 g11725 i0 28.9 0.963576158940397 97 66 96.4 2 1 291 97 190 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 291 50.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32137207 32137207 PRJNA688931_P_NODE_438_length_1464_cov_2.990813_g386_i0 PRJNA688931 438 1464 2.990813 43.78550232 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 59.7 2.46e-5   NR MCX8116456.1 2202153 g386 i0 23.3 0.491803278688525 240 149 48.8 6 34 747 210 416 MCX8116456.1 sodium-translocating pyrophosphatase [Thermodesulfobacteriota bacterium] diamond 720 59.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32275386 32275386 PRJNA688931_P_NODE_12038_length_301_cov_1.682540_g11825_i0 PRJNA688931 12038 301 1.68254 5.0644454 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 51.6 4.02e-5   NR NLZ17542.1 2053307 g11825 i0 44.3 2.90033222591362 70 35 69.8 2 299 90 161 226 NLZ17542.1 CAP domain-containing protein [Desulfobulbaceae bacterium] diamond 873 51.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;