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contig_metadata

4 rows where bioproject = "PRJNA688931", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 4 ✖

tax_kingdom 1

  • Methanobacteriati · 4 ✖

bioproject 1

  • PRJNA688931 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19795386 19795386 PRJNA688931_P_NODE_23856_length_209_cov_1.943750_g23643_i0 PRJNA688931 23856 209 1.94375 4.0624375 root 1 Root_unresolved Root_unresolved 89.4 5.06e-19   NR MCU0859611.1 1906666 g23643 i0 65.6 27.4593301435407 64 22 91.9 0 18 209 3 66 MCU0859611.1 molecular chaperone DnaJ [Thermoplasmata archaeon] diamond 5739 89.7 0.996655518394649 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27809031 27809031 PRJNA688931_P_NODE_1784_length_848_cov_2.093867_g1632_i0 PRJNA688931 1784 848 2.093867 17.75599216 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 47.8 0.0443   NR MDH7508558.1 1906667 g1632 i0 36.8 0.201650943396226 57 36 20.2 0 716 546 19 75 MDH7508558.1 PAS domain S-box protein [Methanomassiliicoccales archaeon] diamond 171 47.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
28029936 28029936 PRJNA688931_P_NODE_34125_length_172_cov_1.252033_g33912_i0 PRJNA688931 34125 172 1.252033 2.15349676 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 50.8 2.01e-5   NR MFL2947514.1 2163009 g33912 i0 36.4 4.56976744186047 55 35 95.9 0 172 8 155 209 MFL2947514.1 isopentenyl-diphosphate delta-isomerase [Candidatus Poseidoniales archaeon] diamond 786 50.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
28156331 28156331 PRJNA688931_P_NODE_17445_length_246_cov_1.050761_g17232_i0 PRJNA688931 17445 246 1.050761 2.58487206 Thermoplasmatota archaeon 2806419 Archaea Archaea 45.1 0.00565   NR MCL4450642.1 2806419 g17232 i0 47.7 1.59756097560976 44 23 53.7 0 1 132 260 303 MCL4450642.1 deoxyhypusine synthase [Thermoplasmatota archaeon] diamond 393 45.1 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;