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contig_metadata

17 rows where bioproject = "PRJNA688931" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 17 ✖

bioproject 1

  • PRJNA688931 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
668482 668482 PRJNA688931_P_NODE_25941_length_200_cov_2.026490_g25728_i0 PRJNA688931 25941 200 2.02649 4.05298 Thermococcus sp. 2319x1 1674923 Archaea Archaea 58.4 3.73e-4   NTclustered gi|1839133054|emb|LR778300.1| 1674923 g25728 i0 100 0.46 31 0 16 0 37 67 306700 306670 Thermococcus sp. 2319x1 strain Essen genome assembly, chromosome: 1 blastn 92 58.4 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. 2319x1
19795386 19795386 PRJNA688931_P_NODE_23856_length_209_cov_1.943750_g23643_i0 PRJNA688931 23856 209 1.94375 4.0624375 root 1 Root_unresolved Root_unresolved 89.4 5.06e-19   NR MCU0859611.1 1906666 g23643 i0 65.6 27.4593301435407 64 22 91.9 0 18 209 3 66 MCU0859611.1 molecular chaperone DnaJ [Thermoplasmata archaeon] diamond 5739 89.7 0.996655518394649 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
23621318 23621318 PRJNA688931_P_NODE_18939_length_235_cov_2.521505_g18726_i0 PRJNA688931 18939 235 2.521505 5.92553675 Halomarina pelagica 2961599 Archaea Archaea 71.3 5.81e-8   NTclustered gi|2270305250|gb|CP100454.1| 2961599 g18726 i0 92 1.15744680851064 50 4 21 0 173 222 1375429 1375380 Halomarina pelagica strain BND7 chromosome, complete genome blastn 272 71.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina pelagica
26935567 26935567 PRJNA688931_P_NODE_16942_length_249_cov_2.150000_g16729_i0 PRJNA688931 16942 249 2.15 5.3535 Archaea 2157 Archaea Archaea 45.8 3.92e-4   NR KUO40167.1 1776334 g16729 i0 45.8 1.73493975903614 48 25 57.8 1 249 106 15 61 KUO40167.1 MAG: hypothetical protein APZ16_07070 [Candidatus Hadarchaeum yellowstonense] diamond 432 45.8 1 Archaea   Methanobacteriati Candidatus Hadarchaeota Candidatus Hadarchaeia Candidatus Hadarchaeales Candidatus Hadarchaeaceae Candidatus Hadarchaeum Candidatus Hadarchaeum yellowstonense
27556026 27556026 PRJNA688931_P_NODE_36144_length_168_cov_0.873950_g35931_i0 PRJNA688931 36144 168 0.87395 1.468236 Halonotius sp. F2-221B 2731620 Archaea Archaea 41.6 0.0346   NR WP_411797635.1 2731620 g35931 i0 48.8 0.767857142857143 43 20 76.8 1 23 151 249 289 WP_411797635.1 histidine kinase N-terminal 7TM domain-containing protein [Halonotius sp. F2-221B] diamond 129 41.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halonotius Halonotius sp. F2-221B
27809031 27809031 PRJNA688931_P_NODE_1784_length_848_cov_2.093867_g1632_i0 PRJNA688931 1784 848 2.093867 17.75599216 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 47.8 0.0443   NR MDH7508558.1 1906667 g1632 i0 36.8 0.201650943396226 57 36 20.2 0 716 546 19 75 MDH7508558.1 PAS domain S-box protein [Methanomassiliicoccales archaeon] diamond 171 47.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
28029928 28029928 PRJNA688931_P_NODE_27585_length_194_cov_1.400000_g27372_i0 PRJNA688931 27585 194 1.4 2.716 Archaeoglobaceae archaeon 2511821 Archaea Archaea 43.1 0.0139   NR MEM4495995.1 2511821 g27372 i0 36.8 0.881443298969072 57 35 88.1 1 14 184 208 263 MEM4495995.1 phosphate uptake regulator PhoU [Archaeoglobaceae archaeon] diamond 171 43.1 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
28029936 28029936 PRJNA688931_P_NODE_34125_length_172_cov_1.252033_g33912_i0 PRJNA688931 34125 172 1.252033 2.15349676 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 50.8 2.01e-5   NR MFL2947514.1 2163009 g33912 i0 36.4 4.56976744186047 55 35 95.9 0 172 8 155 209 MFL2947514.1 isopentenyl-diphosphate delta-isomerase [Candidatus Poseidoniales archaeon] diamond 786 50.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
28156331 28156331 PRJNA688931_P_NODE_17445_length_246_cov_1.050761_g17232_i0 PRJNA688931 17445 246 1.050761 2.58487206 Thermoplasmatota archaeon 2806419 Archaea Archaea 45.1 0.00565   NR MCL4450642.1 2806419 g17232 i0 47.7 1.59756097560976 44 23 53.7 0 1 132 260 303 MCL4450642.1 deoxyhypusine synthase [Thermoplasmatota archaeon] diamond 393 45.1 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28356979 28356979 PRJNA688931_P_NODE_42566_length_163_cov_0.894737_g42353_i0 PRJNA688931 42566 163 0.894737 1.45842131 root 1 Root_unresolved Root_unresolved 46.6 5.64e-4   NR HDS44682.1 2268195 g42353 i0 43.2 10.6748466257669 44 25 81 0 132 1 251 294 HDS44682.1 hypothetical protein [Methanomicrobia archaeon] diamond 1740 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia       Methanomicrobia archaeon
28377085 28377085 PRJNA688931_P_NODE_9626_length_342_cov_1.242321_g9413_i0 PRJNA688931 9626 342 1.242321 4.24873782 Thermococcus sp. 35749 Archaea Archaea 46.2 0.00645   NR WP_297523431.1 35749 g9413 i0 36.8 1.31578947368421 76 44 64.9 2 17 238 333 406 WP_297523431.1 flippase [Thermococcus sp.] diamond 450 46.2 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp.
29746114 29746114 PRJNA688931_P_NODE_5290_length_483_cov_2.048387_g5078_i0 PRJNA688931 5290 483 2.048387 9.89370921 Methanomicrobia 224756 Archaea Archaea 124 1.15e-30   NR MCX6675397.1 90426 g5078 i0 46.5 4.77639751552795 129 68 80.1 1 388 2 123 250 MCX6675397.1 translation elongation factor EF-1 subunit alpha [Methanothrix sp.] diamond 2307 125 0.992 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
29797873 29797873 PRJNA688931_P_NODE_30051_length_185_cov_1.485294_g29838_i0 PRJNA688931 30051 185 1.485294 2.7477939 Methanosarcina hadiensis 3078083 Archaea Archaea 41.6 0.0434   NR WP_410508748.1 3078083 g29838 i0 38.8 0.794594594594595 49 26 73 1 15 149 59 107 WP_410508748.1 PHP domain-containing protein [Methanosarcina hadiensis] diamond 147 41.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina hadiensis
31694124 31694124 PRJNA688931_P_NODE_1797_length_845_cov_3.276382_g1645_i0 PRJNA688931 1797 845 3.276382 27.6854279 Methanoregulaceae archaeon 2485498 Archaea Archaea 69.7 2.68e-9   NR HNJ81026.1 2485498 g1645 i0 53.3 0.21301775147929 60 26 21.3 1 741 562 603 660 HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon] diamond 180 69.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
31757463 31757463 PRJNA688931_P_NODE_40557_length_164_cov_0.904348_g40344_i0 PRJNA688931 40557 164 0.904348 1.48313072 Methanoregula sp. 2052170 Archaea Archaea 53.1 2.67e-6   NR MCX6691449.1 2052170 g40344 i0 47.9 0.878048780487805 48 25 87.8 0 4 147 140 187 MCX6691449.1 CinA family protein [Methanoregula sp.] diamond 144 53.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
32263935 32263935 PRJNA688931_P_NODE_1678_length_871_cov_2.105839_g1530_i0 PRJNA688931 1678 871 2.105839 18.34185769 Methanobrevibacter sp. 66852 Archaea Archaea 80.5 6.19e-13   NR MBO7518105.1 66852 g1530 i0 54.7 0.730195177956372 64 27 21.4 1 535 350 420 483 MBO7518105.1 hypothetical protein [Methanobrevibacter sp.] diamond 636 80.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32642704 32642704 PRJNA688931_P_NODE_28100_length_192_cov_1.328671_g27887_i0 PRJNA688931 28100 192 1.328671 2.55104832 Methanocaldococcus sp. FS4 2152917 Archaea Archaea 42 0.0349   NR WP_012981188.1 644281 g27887 i0 40 0.9375 60 34 93.8 1 188 9 183 240 WP_012981188.1 histidine--tRNA ligase [Methanocaldococcus sp. FS406-22] diamond 180 42 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus sp. FS406-22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;