RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA688931", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA688931 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12147745 12147745 PRJNA688931_P_NODE_17910_length_242_cov_2.316062_g17697_i0 PRJNA688931 17910 242 2.316062 5.60487004 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 99.4 5.34e-23   NR PJF19907.1 1246581 g17697 i0 61.3 2.97520661157025 80 28 99.2 1 242 3 175 251 PJF19907.1 Isobutyryl-CoA dehydrogenase [Paramicrosporidium saccamoebae] diamond 720 99.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
27555989 27555989 PRJNA688931_P_NODE_15324_length_263_cov_58.799065_g15111_i0 PRJNA688931 15324 263 58.799065 154.64154095 Rozella allomycis CSF55 988480 Fungi Fungi 83.6 3.43e-17   NR EPZ34692.1 988480 g15111 i0 66.2 3.58174904942966 65 21 73 1 28 219 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 83.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28345568 28345568 PRJNA688931_P_NODE_34206_length_171_cov_2.598361_g33993_i0 PRJNA688931 34206 171 2.598361 4.44319731 Rozella allomycis CSF55 988480 Fungi Fungi 43.5 0.00703   NR EPZ36383.1 988480 g33993 i0 46.2 1.43859649122807 39 21 68.4 0 27 143 79 117 EPZ36383.1 RNA recognition motif domain-containing protein [Rozella allomycis CSF55] diamond 246 43.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31694169 31694169 PRJNA688931_P_NODE_41237_length_164_cov_0.886957_g41024_i0 PRJNA688931 41237 164 0.886957 1.45460948 Rozella allomycis CSF55 988480 Fungi Fungi 93.2 2.08e-20   NR RKP16814.1 988480 g41024 i0 72.2 2.96341463414634 54 15 98.8 0 164 3 314 367 RKP16814.1 glycoside hydrolase, partial [Rozella allomycis CSF55] diamond 486 93.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32517064 32517064 PRJNA688931_P_NODE_8799_length_360_cov_2.028939_g8586_i0 PRJNA688931 8799 360 2.028939 7.3041804 Rozella allomycis CSF55 988480 Fungi Fungi 164 1.24e-49   NR EPZ31907.1 988480 g8586 i0 72.8 0.95 114 31 95 0 14 355 1 114 EPZ31907.1 60S ribosomal protein L26-2 [Rozella allomycis CSF55] diamond 342 164 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32705823 32705823 PRJNA688931_P_NODE_19180_length_234_cov_1.135135_g18967_i0 PRJNA688931 19180 234 1.135135 2.6562159 Rozella allomycis CSF55 988480 Fungi Fungi 42.4 0.0452   NR EPZ33272.1 988480 g18967 i0 38 0.91025641025641 71 37 88.5 2 3 209 523 588 EPZ33272.1 AP-1 complex subunit gamma-1-like protein [Rozella allomycis CSF55] diamond 213 42.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32737604 32737604 PRJNA688931_P_NODE_15180_length_265_cov_1.333333_g14967_i0 PRJNA688931 15180 265 1.333333 3.53333245 Rozella allomycis CSF55 988480 Fungi Fungi 102 1.74e-23   NR RKP20874.1 988480 g14967 i0 54.5 13.8 88 40 99.6 0 1 264 213 300 RKP20874.1 putative aspartate aminotransferase [Rozella allomycis CSF55] diamond 3657 102 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;