RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA688931" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA688931 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29135214 29135214 PRJNA688931_P_NODE_4309_length_539_cov_2.504082_g4101_i0 PRJNA688931 4309 539 2.504082 13.49700198 Fadolivirus algeromassiliense 3060017 Viruses Viruses 149 1.31e-39   NR YP_010803269.1 3060017 g4101 i0 49.3 0.768089053803339 138 70 76.8 0 535 122 276 413 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 414 149 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
29461868 29461868 PRJNA688931_P_NODE_20950_length_223_cov_2.890805_g20737_i0 PRJNA688931 20950 223 2.890805 6.44649515 Mimiviridae 549779 Viruses Viruses 101 3.37e-23   NR ARF12269.1 1977640 g20737 i0 52.1 1.97757847533632 73 35 98.2 0 4 222 22 94 ARF12269.1 ornithine decarboxylase [Klosneuvirus KNV1] diamond 441 101 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
30777469 30777469 PRJNA688931_P_NODE_28414_length_191_cov_1.091549_g28201_i0 PRJNA688931 28414 191 1.091549 2.08485859 Catovirus CTV1 1977631 Viruses Viruses 67.8 2.71e-11   NR ARF08384.1 1977631 g28201 i0 50.8 0.989528795811518 63 31 99 0 191 3 344 406 ARF08384.1 choline dehydrogenase / GMC-type oxidoreductase [Catovirus CTV1] diamond 189 67.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus CTV1
30872119 30872119 PRJNA688931_P_NODE_1834_length_836_cov_3.289708_g1681_i0 PRJNA688931 1834 836 3.289708 27.50195888 Fadolivirus algeromassiliense 3060017 Viruses Viruses 409 1.06e-139   NR YP_010803269.1 3060017 g1681 i0 69.1 0.997607655502392 278 85 99.8 1 835 2 85 361 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 834 409 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;