RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA688931", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA688931 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8321667 8321667 PRJNA688931_P_NODE_32127_length_178_cov_1.372093_g31914_i0 PRJNA688931 32127 178 1.372093 2.44232554 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 104 4.1e-18   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g31914 i0 78.916 18.561797752809 166 26 91 7 17 178 5032819 5032659 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 3304 104 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
13422437 13422437 PRJNA688931_P_NODE_33051_length_175_cov_1.611111_g32838_i0 PRJNA688931 33051 175 1.611111 2.81944425 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 56.5 0.001   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g32838 i0 100 0.17142857142857101 30 0 17 0 32 61 7806490 7806519 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 30 56.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
28818861 28818861 PRJNA688931_P_NODE_14828_length_268_cov_2.086758_g14615_i0 PRJNA688931 14828 268 2.086758 5.59251144 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 149 2.16e-40   NR MFA5507019.1 3107663 g14615 i0 78.7 0.996268656716418 89 18 99.6 1 2 268 279 366 MFA5507019.1 phosphoenolpyruvate carboxykinase (ATP) [Vulcanimicrobiota bacterium] diamond 267 149 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
29608177 29608177 PRJNA688931_P_NODE_33350_length_174_cov_1.648000_g33137_i0 PRJNA688931 33350 174 1.648 2.86752 Candidatus Eremiobacteraceae bacterium 3069296 Bacteria Bacteria 42 0.0288   NR HEY7980436.1 3069296 g33137 i0 36.8 0.982758620689655 57 35 96.6 1 4 171 494 550 HEY7980436.1 sedoheptulose 7-phosphate cyclase [Candidatus Eremiobacteraceae bacterium] diamond 171 42 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;