contig_metadata
5 rows where bioproject = "PRJNA688931", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8321670 | 8321670 | PRJNA688931_P_NODE_32647_length_176_cov_2.031496_g32434_i0 | PRJNA688931 | 32647 | 176 | 2.031496 | 3.57543296 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 130 | 6.670000000000001e-26 | NTclustered | gi|2874253999|emb|OY970324.1| | 34034 | g32434 | i0 | 82.781 | 1.10795454545455 | 151 | 20 | 84 | 6 | 26 | 173 | 83646 | 83499 | MAG: uncultured delta proteobacterium isolate MFD05502.bin.1.132 genome assembly, chromosome: 1 | blastn | 195 | 130 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 11381509 | 11381509 | PRJNA688931_P_NODE_11729_length_305_cov_2.730469_g11516_i0 | PRJNA688931 | 11729 | 305 | 2.730469 | 8.32793045 | Bacteria | 2 | Bacteria | Bacteria | 65.8 | 3.65e-6 | NTclustered | gi|618731234|emb|HE803860.1| | 34034 | g11516 | i0 | 91.489 | 0.308196721311475 | 47 | 4 | 15 | 0 | 201 | 247 | 1346 | 1300 | Uncultured delta proteobacterium partial 16S rRNA gene, isolate 1.2, clone 2 | blastn | 94 | 65.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 20304465 | 20304465 | PRJNA688931_P_NODE_29236_length_188_cov_1.172662_g29023_i0 | PRJNA688931 | 29236 | 188 | 1.172662 | 2.20460456 | Bacteria | 2 | Bacteria | Bacteria | 298 | 1.87e-76 | NTclustered | gi|451917518|gb|KC451382.1| | 34034 | g29023 | i0 | 95.263 | 99.6595744680851 | 190 | 5 | 100 | 4 | 1 | 188 | 219 | 32 | Uncultured delta proteobacterium clone RLBp4899 16S ribosomal RNA gene, partial sequence | blastn | 18736 | 298 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 27682863 | 27682863 | PRJNA688931_P_NODE_21884_length_219_cov_1.017647_g21671_i0 | PRJNA688931 | 21884 | 219 | 1.017647 | 2.22864693 | SAR324 cluster bacterium | 2024889 | Bacteria | Bacteria | 47 | 8.35e-4 | NR | MEC7166297.1 | 2024889 | g21671 | i0 | 50 | 1.3972602739726 | 52 | 24 | 71.2 | 2 | 2 | 157 | 200 | 249 | MEC7166297.1 Ig-like domain-containing protein [SAR324 cluster bacterium] | diamond | 306 | 47 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | SAR324 cluster bacterium | ||||||
| 29809406 | 29809406 | PRJNA688931_P_NODE_24211_length_208_cov_1.264151_g23998_i0 | PRJNA688931 | 24211 | 208 | 1.264151 | 2.62943408 | root | 1 | Root_unresolved | Root_unresolved | 57 | 2.23e-7 | NR | EFK09763.1 | 88274 | g23998 | i0 | 42.4 | 1.84615384615385 | 59 | 34 | 85.1 | 0 | 28 | 204 | 281 | 339 | EFK09763.1 GAF domain protein [delta proteobacterium NaphS2] | diamond | 384 | 57 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | delta proteobacterium NaphS2 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;