RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA688931" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 2 ✖

bioproject 1

  • PRJNA688931 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32263935 32263935 PRJNA688931_P_NODE_1678_length_871_cov_2.105839_g1530_i0 PRJNA688931 1678 871 2.105839 18.34185769 Methanobrevibacter sp. 66852 Archaea Archaea 80.5 6.19e-13   NR MBO7518105.1 66852 g1530 i0 54.7 0.730195177956372 64 27 21.4 1 535 350 420 483 MBO7518105.1 hypothetical protein [Methanobrevibacter sp.] diamond 636 80.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32642704 32642704 PRJNA688931_P_NODE_28100_length_192_cov_1.328671_g27887_i0 PRJNA688931 28100 192 1.328671 2.55104832 Methanocaldococcus sp. FS4 2152917 Archaea Archaea 42 0.0349   NR WP_012981188.1 644281 g27887 i0 40 0.9375 60 34 93.8 1 188 9 183 240 WP_012981188.1 histidine--tRNA ligase [Methanocaldococcus sp. FS406-22] diamond 180 42 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus sp. FS406-22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;