RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA688931", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA688931 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30082151 30082151 PRJNA688931_P_NODE_33572_length_173_cov_2.508065_g33359_i0 PRJNA688931 33572 173 2.508065 4.33895245 Ignavibacteria bacterium 2053306 Bacteria Bacteria 46.2 8.05e-4   NR MCC7158027.1 2053306 g33359 i0 45.2 2.34104046242775 42 21 72.8 1 135 10 119 158 MCC7158027.1 T9SS type A sorting domain-containing protein [Ignavibacteria bacterium] diamond 405 46.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30536125 30536125 PRJNA688931_P_NODE_14493_length_271_cov_2.378378_g14280_i0 PRJNA688931 14493 271 2.378378 6.44540438 Pseudomonadati 3379134 Bacteria Bacteria 116 2.99e-28   NR MCX6158752.1 2026749 g14280 i0 56.7 2.98892988929889 90 39 99.6 0 270 1 160 249 MCX6158752.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Ignavibacteriota bacterium] diamond 810 117 0.991452991452991 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;