RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA688931", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA688931 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5772187 5772187 PRJNA688931_P_NODE_39345_length_165_cov_1.043103_g39132_i0 PRJNA688931 39345 165 1.043103 1.72111995 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 272 9.73e-69   NTclustered gi|1799615131|gb|CP045921.1| 2665156 g39132 i0 96.364 66.7878787878788 165 6 100 0 1 165 221224 221388 Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome blastn 11020 272 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
30335488 30335488 PRJNA688931_P_NODE_35812_length_168_cov_1.285714_g35599_i0 PRJNA688931 35812 168 1.285714 2.15999952 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 52.8 3.78e-6   NR MDB5187311.1 2026720 g35599 i0 46.2 0.928571428571429 52 28 92.9 0 2 157 62 113 MDB5187311.1 ADP-ribosylglycohydrolase [Candidatus Saccharibacteria bacterium] diamond 156 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30967108 30967108 PRJNA688931_P_NODE_23054_length_213_cov_1.268293_g22841_i0 PRJNA688931 23054 213 1.268293 2.70146409 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 44.3 0.00678   NR MCA9324640.1 2026720 g22841 i0 39.3 0.859154929577465 61 34 81.7 2 7 180 67 127 MCA9324640.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 183 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;