RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA688931", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA688931 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28693102 28693102 PRJNA688931_P_NODE_40527_length_164_cov_1.069565_g40314_i0 PRJNA688931 40527 164 1.069565 1.7540866 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 43.9 0.00503   NR MCY4402064.1 2026781 g40314 i0 44.7 0.859756097560976 47 26 86 0 10 150 451 497 MCY4402064.1 WD40 repeat domain-containing protein [Candidatus Poribacteria bacterium] diamond 141 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
28988863 28988863 PRJNA688931_P_NODE_38728_length_166_cov_0.880342_g38515_i0 PRJNA688931 38728 166 0.880342 1.46136772 Bacteria candidate phyla 1783234 Bacteria Bacteria 51.2 1.35e-5   NR MBD3183395.1 2026781 g38515 i0 42 6.30722891566265 50 29 90.4 0 2 151 601 650 MBD3183395.1 prolyl oligopeptidase family serine peptidase [Candidatus Poribacteria bacterium] diamond 1047 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32295657 32295657 PRJNA688931_P_NODE_16059_length_257_cov_0.966346_g15846_i0 PRJNA688931 16059 257 0.966346 2.48350922 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 45.4 0.00468   NR MEK7400269.1 2026781 g15846 i0 31.6 0.922178988326848 79 51 89.9 2 247 17 174 251 MEK7400269.1 tetratricopeptide repeat protein [Candidatus Poribacteria bacterium] diamond 237 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;