RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA688931", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA688931 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12147854 12147854 PRJNA688931_P_NODE_32070_length_178_cov_1.589147_g31857_i0 PRJNA688931 32070 178 1.589147 2.82868166 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 180 6.62e-41   NTclustered gi|2621703606|emb|OY761465.1| 2838779 g31857 i0 85.393 80.061797752809 178 21 99 3 3 178 3394346 3394172 MAG: Candidatus Binatia bacterium isolate d3e24e22-6b5b-4867-8422-75782eed2520 genome assembly, chromosome: 1 blastn 14251 180 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
21070966 21070966 PRJNA688931_P_NODE_33657_length_173_cov_1.669355_g33444_i0 PRJNA688931 33657 173 1.669355 2.88798415 Bacillati 1783272 Bacteria Bacteria 118 3.78e-29   NR HET7007126.1 2838779 g33444 i0 94.7 2.94797687861272 57 3 98.8 0 2 172 473 529 HET7007126.1 prolyl oligopeptidase family serine peptidase [Candidatus Binatia bacterium] diamond 510 119 0.991596638655462 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30367066 30367066 PRJNA688931_P_NODE_17072_length_248_cov_2.376884_g16859_i0 PRJNA688931 17072 248 2.376884 5.89467232 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 78.6 3.04e-15   NR HEY6418718.1 2785449 g16859 i0 58.1 3.31451612903226 74 29 89.5 2 224 3 61 132 HEY6418718.1 glutathione S-transferase family protein [Candidatus Binataceae bacterium] diamond 822 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;