RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA688736", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA688736 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14697263 14697263 PRJNA688736_P_NODE_8052_length_521_cov_1.665179_g7769_i0 PRJNA688736 8052 521 1.665179 8.67558259 Basidiobolus haptosporus 90248 Fungi Fungi 351 4.5e-92   NTclustered gi|358030845|dbj|AB609156.1| 90248 g7769 i0 79.038 49.7523992322457 520 103 99 6 4 520 830 1346 Basidiobolus haptosporus EF2 gene for translation elongation factor 2, partial cds, strain: NRRL 28635 blastn 25921 351 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus haptosporus
15970533 15970533 PRJNA688736_P_NODE_35873_length_267_cov_1.608247_g35588_i0 PRJNA688736 35873 267 1.608247 4.29401949 Linderina pennispora 61395 Fungi Fungi 152 2.34e-32   NTclustered gi|2028311994|ref|XM_040883102.1| 61395 g35588 i0 84.076 28.6966292134831 157 25 59 0 49 205 1112 956 Linderina pennispora uncharacterized protein (DL89DRAFT_11075), mRNA blastn 7662 152 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
28629924 28629924 PRJNA688736_P_NODE_46147_length_247_cov_0.896552_g45862_i0 PRJNA688736 46147 247 0.896552 2.21448344 Syncephalis plumigaleata 1851185 Fungi Fungi 65.1 2.63e-11   NR KAI8058154.1 1851185 g45862 i0 46.9 3.93522267206478 81 36 98.4 2 245 3 13 86 KAI8058154.1 hypothetical protein BDF22DRAFT_664195 [Syncephalis plumigaleata] diamond 972 65.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Syncephalis Syncephalis plumigaleata
31472910 31472910 PRJNA688736_P_NODE_18136_length_364_cov_0.993127_g17851_i0 PRJNA688736 18136 364 0.993127 3.61498228 Dimargaris xerosporica 2761399 Fungi Fungi 105 8.990000000000001e-26   NR KAJ1981040.1 2761399 g17851 i0 51.1 1.51648351648352 92 44 75.8 1 320 45 90 180 KAJ1981040.1 hypothetical protein H4R35_000883 [Dimargaris xerosporica] diamond 552 105 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dimargaris Dimargaris xerosporica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;