contig_metadata
4 rows where bioproject = "PRJNA688736", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3219161 | 3219161 | PRJNA688736_P_NODE_7023_length_555_cov_1.473029_g6741_i0 | PRJNA688736 | 7023 | 555 | 1.473029 | 8.17531095 | Rhizophagus irregularis | 588596 | Fungi | Fungi | 54.7 | 0.015 | NTclustered | gi|2749789547|ref|XM_025318976.2| | 588596 | g6741 | i0 | 100 | 0.0522522522522523 | 29 | 0 | 5 | 0 | 28 | 56 | 1195 | 1167 | Rhizophagus irregularis uncharacterized protein (OCT59_027607), mRNA | blastn | 29 | 54.7 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Glomeromycetes | Glomerales | Glomeraceae | Rhizophagus | Rhizophagus irregularis | |
| 5771130 | 5771130 | PRJNA688736_P_NODE_20685_length_344_cov_1.151292_g20400_i0 | PRJNA688736 | 20685 | 344 | 1.151292 | 3.96044448 | Rhizomucor pusillus | 4840 | Fungi | Fungi | 135 | 1.0400000000000001e-36 | NR | XP_069238133.1 | 4840 | g20400 | i0 | 65.7 | 4.91860465116279 | 99 | 34 | 86.3 | 0 | 47 | 343 | 26 | 124 | XP_069238133.1 60S ribosomal protein eL8 [Rhizomucor pusillus] | diamond | 1692 | 135 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Mucoromycetes | Mucorales | Lichtheimiaceae | Rhizomucor | Rhizomucor pusillus | |
| 27682839 | 27682839 | PRJNA688736_P_NODE_48984_length_244_cov_0.912281_g48699_i0 | PRJNA688736 | 48984 | 244 | 0.912281 | 2.22596564 | Rhizophagus irregularis | 588596 | Fungi | Fungi | 54.7 | 2.85e-7 | NR | XP_025179900.1 | 588596 | g48699 | i0 | 33.8 | 0.94672131147541 | 77 | 43 | 84.8 | 2 | 15 | 221 | 41 | 117 | XP_025179900.1 uncharacterized protein OCT59_017387 [Rhizophagus irregularis] | diamond | 231 | 54.7 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Glomeromycetes | Glomerales | Glomeraceae | Rhizophagus | Rhizophagus irregularis | |
| 27820486 | 27820486 | PRJNA688736_P_NODE_7544_length_537_cov_1.226293_g7262_i0 | PRJNA688736 | 7544 | 537 | 1.226293 | 6.58519341 | Lichtheimiaceae | 499202 | Fungi | Fungi | 184 | 6.029999999999999e-56 | NR | XP_052975034.1 | 64656 | g7262 | i0 | 53.6 | 5.56424581005587 | 166 | 75 | 91.6 | 1 | 502 | 11 | 1 | 166 | XP_052975034.1 translationally controlled tumor protein [Zychaea mexicana] | diamond | 2988 | 184 | 1 | Eukaryota | Opisthokonta | Fungi | Mucoromycota | Mucoromycetes | Mucorales | Lichtheimiaceae | Zychaea | Zychaea mexicana |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;