RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA688736", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA688736 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1177168 1177168 PRJNA688736_P_NODE_16101_length_383_cov_1.006452_g15816_i0 PRJNA688736 16101 383 1.006452 3.85471116 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 78.7 6.03e-10   NTclustered gi|319412263|gb|HQ840955.1| 227086 g15816 i0 95.833 1.57702349869452 48 2 13 0 331 378 14562 14515 Bigelowiella natans culture-collection CCMP:621 mitochondrion, partial genome blastn 604 78.7 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
15970314 15970314 PRJNA688736_P_NODE_26433_length_309_cov_2.737288_g26148_i0 PRJNA688736 26433 309 2.737288 8.45821992 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 333 9.2e-87   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g26148 i0 86.645 54.0388349514563 307 34 99 6 1 305 3706 4007 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16698 333 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;