contig_metadata
11 rows where bioproject = "PRJNA688736" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8830250 | 8830250 | PRJNA688736_P_NODE_22827_length_330_cov_1.214008_g22542_i0 | PRJNA688736 | 22827 | 330 | 1.214008 | 4.0062264 | Gemmata | 113 | Bacteria | Bacteria | 494 | 4.29e-135 | NTclustered | gi|12583965|gb|AF245369.1|AF245369 | 114 | g22542 | i0 | 93.675 | 141.193939393939 | 332 | 17 | 100 | 4 | 1 | 330 | 687 | 1016 | Gemmata obscuriglobus 23S ribosomal RNA gene, partial sequence | blastn | 46594 | 494 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 10872274 | 10872274 | PRJNA688736_P_NODE_50229_length_242_cov_1.485207_g49944_i0 | PRJNA688736 | 50229 | 242 | 1.485207 | 3.59420094 | Isosphaeraceae bacterium EP7 | 3139350 | Bacteria | Bacteria | 285 | 1.97e-72 | NTclustered | gi|2719878338|gb|CP151667.1| | 3139350 | g49944 | i0 | 90.045 | 0.913223140495868 | 221 | 21 | 91 | 1 | 22 | 242 | 4824011 | 4824230 | Isosphaeraceae bacterium EP7 chromosome, complete genome | blastn | 221 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium EP7 | ||
| 13421672 | 13421672 | PRJNA688736_P_NODE_30731_length_289_cov_1.430556_g30446_i0 | PRJNA688736 | 30731 | 289 | 1.430556 | 4.13430684 | Bacteria | 2 | Bacteria | Bacteria | 149 | 2.4699999999999998e-43 | NR | MCA1686249.1 | 2052181 | g30446 | i0 | 77.1 | 6.9757785467128 | 96 | 22 | 99.7 | 0 | 2 | 289 | 19 | 114 | MCA1686249.1 methyltransferase domain-containing protein [Planctomycetia bacterium] | diamond | 2016 | 149 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 17245714 | 17245714 | PRJNA688736_P_NODE_34014_length_275_cov_1.351485_g33729_i0 | PRJNA688736 | 34014 | 275 | 1.351485 | 3.71658375 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 326 | 1.35e-84 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g33729 | i0 | 89.354 | 92.0909090909091 | 263 | 23 | 94 | 4 | 1 | 258 | 1830995 | 1831257 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 25325 | 326 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 22344857 | 22344857 | PRJNA688736_P_NODE_21358_length_339_cov_4.424812_g21073_i0 | PRJNA688736 | 21358 | 339 | 4.424812 | 15.00011268 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 532 | 9.38e-147 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g21073 | i0 | 95.015 | 156.666666666667 | 341 | 13 | 100 | 4 | 1 | 339 | 5934820 | 5935158 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 53110 | 532 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 22855188 | 22855188 | PRJNA688736_P_NODE_45598_length_247_cov_0.896552_g45313_i0 | PRJNA688736 | 45598 | 247 | 0.896552 | 2.21448344 | Gemmataceae | 1914233 | Bacteria | Bacteria | 327 | 3.31e-85 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g45313 | i0 | 92.544 | 196.97975708502 | 228 | 17 | 92 | 0 | 1 | 228 | 2018466 | 2018693 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 48654 | 327 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 23620884 | 23620884 | PRJNA688736_P_NODE_41599_length_251_cov_1.314607_g41314_i0 | PRJNA688736 | 41599 | 251 | 1.314607 | 3.29966357 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 381 | 2.549999999999999e-101 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g41314 | i0 | 94.071 | 56.3147410358566 | 253 | 11 | 100 | 4 | 1 | 251 | 1830841 | 1830591 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 14135 | 381 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 28945718 | 28945718 | PRJNA688736_P_NODE_42408_length_250_cov_1.762712_g42123_i0 | PRJNA688736 | 42408 | 250 | 1.762712 | 4.40678 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 41.2 | 0.0463 | NR | HAM41179.1 | 2035772 | g42123 | i0 | 42.1 | 0.456 | 38 | 22 | 45.6 | 0 | 161 | 48 | 24 | 61 | HAM41179.1 hypothetical protein [Candidatus Omnitrophota bacterium] | diamond | 114 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 30030712 | 30030712 | PRJNA688736_P_NODE_33231_length_278_cov_1.536585_g32946_i0 | PRJNA688736 | 33231 | 278 | 1.536585 | 4.2717063 | Paludisphaera | 1763521 | Bacteria | Bacteria | 89 | 2.02e-18 | NR | MFO0956061.1 | 2691532 | g32946 | i0 | 47.8 | 2.96762589928058 | 92 | 48 | 99.3 | 0 | 2 | 277 | 273 | 364 | MFO0956061.1 YbdK family carboxylate-amine ligase [Isosphaeraceae bacterium] | diamond | 825 | 89 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium | ||
| 30208367 | 30208367 | PRJNA688736_P_NODE_44012_length_249_cov_0.886364_g43727_i0 | PRJNA688736 | 44012 | 249 | 0.886364 | 2.20704636 | Estrella lausannensis | 483423 | Bacteria | Bacteria | 131 | 2.18e-33 | NR | WP_098037505.1 | 483423 | g43727 | i0 | 87.8 | 0.987951807228916 | 82 | 10 | 98.8 | 0 | 2 | 247 | 127 | 208 | WP_098037505.1 tetratricopeptide repeat protein [Estrella lausannensis] | diamond | 246 | 131 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Estrella | Estrella lausannensis | |
| 32485304 | 32485304 | PRJNA688736_P_NODE_41079_length_252_cov_0.871508_g40794_i0 | PRJNA688736 | 41079 | 252 | 0.871508 | 2.19620016 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 41.6 | 0.038 | NR | NDG65015.1 | 2026780 | g40794 | i0 | 50 | 0.428571428571429 | 36 | 17 | 41.7 | 1 | 130 | 26 | 6 | 41 | NDG65015.1 hypothetical protein [Planctomycetota bacterium] | diamond | 108 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;