RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA688655" and tax_phylum = "Kitrinoviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA688655 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4495178 4495178 PRJNA688655_P_NODE_5544_length_285_cov_1.367925_g5479_i0 PRJNA688655 5544 285 1.367925 3.89858625 Eriocheir sinensis kita-like virus 3022112 Viruses Viruses 505 1.6799999999999995e-138   NTclustered gi|2430285606|gb|OP019101.1| 3022112 g5479 i0 98.596 1 285 4 100 0 1 285 10963 10679 MAG: Eriocheir sinensis kita-like virus isolate Suqian, Jiangsu genomic sequence blastn 285 505 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Kitaviridae   Eriocheir sinensis kita-like virus
21069547 21069547 PRJNA688655_P_NODE_137_length_1304_cov_1.519090_g109_i0 PRJNA688655 137 1304 1.51909 19.8089336 Eriocheir sinensis kita-like virus 3022112 Viruses Viruses 1360 0   NTclustered gi|2430285606|gb|OP019101.1| 3022112 g109 i0 99.865 1.03067484662577 739 1 100 0 1 739 11290 12028 MAG: Eriocheir sinensis kita-like virus isolate Suqian, Jiangsu genomic sequence blastn 1344 1360 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Kitaviridae   Eriocheir sinensis kita-like virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;