RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA688655" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688655 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28787399 28787399 PRJNA688655_P_NODE_5167_length_292_cov_1.406393_g5102_i0 PRJNA688655 5167 292 1.406393 4.10666756 Fidelibacterota bacterium 2026760 Bacteria Bacteria 49.7 2.48e-4   NR MBD67538.1 2026760 g5102 i0 41.1 0.575342465753425 56 28 57.5 1 103 270 710 760 MBD67538.1 hypothetical protein [Fidelibacterota bacterium] diamond 168 49.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31061982 31061982 PRJNA688655_P_NODE_12775_length_245_cov_0.895349_g12710_i0 PRJNA688655 12775 245 0.895349 2.19360505 Fidelibacterota bacterium 2026760 Bacteria Bacteria 68.2 6e-13   NR MCG2715360.1 2026760 g12710 i0 69.4 1.2 49 15 60 0 2 148 30 78 MCG2715360.1 BrnA antitoxin family protein [Fidelibacterota bacterium] diamond 294 68.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31536216 31536216 PRJNA688655_P_NODE_8976_length_250_cov_0.870056_g8911_i0 PRJNA688655 8976 250 0.870056 2.17514 Fidelibacterota bacterium 2026760 Bacteria Bacteria 140 1.2999999999999998e-38   NR MEA2077807.1 2026760 g8911 i0 77.1 0.996 83 19 99.6 0 1 249 131 213 MEA2077807.1 NAD-dependent epimerase/dehydratase family protein [Fidelibacterota bacterium] diamond 249 140 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32327309 32327309 PRJNA688655_P_NODE_8479_length_250_cov_0.870056_g8414_i0 PRJNA688655 8479 250 0.870056 2.17514 Fidelibacterota bacterium 2026760 Bacteria Bacteria 61.2 1.24e-8   NR MEE9571435.1 2026760 g8414 i0 38.6 0.996 83 44 99.6 1 249 1 94 169 MEE9571435.1 hypothetical protein [Fidelibacterota bacterium] diamond 249 61.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;