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contig_metadata

6 rows where bioproject = "PRJNA688655" and tax_phylum = "Candidatus Shapironibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Shapironibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA688655 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17245089 17245089 PRJNA688655_P_NODE_15274_length_242_cov_0.911243_g15209_i0 PRJNA688655 15274 242 0.911243 2.20520806 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 169 1.4e-47   NR MCW1949470.1 2053613 g15209 i0 97.5 0.991735537190083 80 2 99.2 0 242 3 23 102 MCW1949470.1 DNA primase [Candidatus Shapirobacteria bacterium] diamond 240 169 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
26892633 26892633 PRJNA688655_P_NODE_9581_length_249_cov_0.875000_g9516_i0 PRJNA688655 9581 249 0.875 2.17875 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 90.1 2.9e-20   NR MCW1949147.1 2053613 g9516 i0 95.5 0.530120481927711 44 2 53 0 249 118 153 196 MCW1949147.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 132 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29103477 29103477 PRJNA688655_P_NODE_7548_length_252_cov_1.720670_g7483_i0 PRJNA688655 7548 252 1.72067 4.3360884 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 57.8 6.28e-9   NR MFA7676525.1 2053613 g7483 i0 83.3 0.738095238095238 30 5 35.7 0 252 163 33 62 MFA7676525.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 186 57.8 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29387633 29387633 PRJNA688655_P_NODE_6829_length_263_cov_1.621053_g6764_i0 PRJNA688655 6829 263 1.621053 4.26336939 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 189 1.86e-58   NR MBP6891384.1 2053613 g6764 i0 100 0.992395437262357 87 0 99.2 0 2 262 118 204 MBP6891384.1 exodeoxyribonuclease III [Candidatus Shapirobacteria bacterium] diamond 261 189 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
30050524 30050524 PRJNA688655_P_NODE_9391_length_249_cov_0.875000_g9326_i0 PRJNA688655 9391 249 0.875 2.17875 Candidatus Shapirobacteria bacterium CG 2053613 Bacteria Bacteria 145 2.18e-40   NR PIU33309.1 1974480 g9326 i0 81.3 1.92771084337349 80 15 96.4 0 2 241 269 348 PIU33309.1 MAG: hypothetical protein COT04_00755 [Candidatus Shapirobacteria bacterium CG07_land_8_20_14_0_80_39_12] diamond 480 145 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium CG07_land_8_20_14_0_80_39_12
32737575 32737575 PRJNA688655_P_NODE_13900_length_244_cov_0.900585_g13835_i0 PRJNA688655 13900 244 0.900585 2.1974274 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 127 1.2099999999999999e-32   NR MBP6891732.1 2053613 g13835 i0 87.5 0.983606557377049 80 3 98.4 1 242 3 333 405 MBP6891732.1 DNA repair protein RadA [Candidatus Shapirobacteria bacterium] diamond 240 127 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;