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contig_metadata

4 rows where bioproject = "PRJNA688655" and tax_phylum = "Candidatus Gottesmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Gottesmaniibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA688655 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21069612 21069612 PRJNA688655_P_NODE_3817_length_321_cov_1.362903_g3752_i0 PRJNA688655 3817 321 1.362903 4.37491863 Bacteria 2 Bacteria Bacteria 83.6 4.15e-16   NR KKS98186.1 1618443 g3752 i0 91.1 4.05607476635514 45 4 42.1 0 2 136 383 427 KKS98186.1 MAG: general secretory pathway protein E, type IV pilus assembly protein PilB [Candidatus Gottesmanbacteria bacterium GW2011_GWA2_43_14] diamond 1302 84.3 0.991696322657177 Bacteria Bacteria candidate phyla   Candidatus Gottesmaniibacteriota         Candidatus Gottesmanbacteria bacterium GW2011_GWA2_43_14
29008934 29008934 PRJNA688655_P_NODE_10748_length_248_cov_0.880000_g10683_i0 PRJNA688655 10748 248 0.88 2.1824 Candidatus Gottesmanbacteria bacterium 2282145 Bacteria Bacteria 112 1e-27   NR MBI3577188.1 2282145 g10683 i0 68.8 0.931451612903226 77 24 93.1 0 246 16 171 247 MBI3577188.1 hypothetical protein [Candidatus Gottesmanbacteria bacterium] diamond 231 112 1 Bacteria Bacteria candidate phyla   Candidatus Gottesmaniibacteriota         Candidatus Gottesmanbacteria bacterium
29166673 29166673 PRJNA688655_P_NODE_15049_length_243_cov_0.888235_g14984_i0 PRJNA688655 15049 243 0.888235 2.15841105 Candidatus Gottesmanbacteria bacterium RBG_13_45_1 2282145 Bacteria Bacteria 105 1.06e-24   NR OGG11412.1 1798370 g14984 i0 63 1.98765432098765 81 30 100 0 1 243 169 249 OGG11412.1 MAG: histidine--tRNA ligase [Candidatus Gottesmanbacteria bacterium RBG_13_45_10] diamond 483 105 1 Bacteria Bacteria candidate phyla   Candidatus Gottesmaniibacteriota         Candidatus Gottesmanbacteria bacterium RBG_13_45_10
30272114 30272114 PRJNA688655_P_NODE_15912_length_242_cov_0.905325_g15847_i0 PRJNA688655 15912 242 0.905325 2.1908865 Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_ 2282145 Bacteria Bacteria 87 6.04e-19   NR OGG15539.1 1798382 g15847 i0 58.7 0.929752066115702 75 31 93 0 3 227 122 196 OGG15539.1 MAG: hypothetical protein A3D77_05855 [Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_02_FULL_39_11] diamond 225 87 1 Bacteria Bacteria candidate phyla   Candidatus Gottesmaniibacteriota         Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_02_FULL_39_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;