RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where bioproject = "PRJNA688655" and tax_phylum = "Candidatus Cloacimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688655 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13421134 13421134 PRJNA688655_P_NODE_3711_length_324_cov_1.227092_g3646_i0 PRJNA688655 3711 324 1.227092 3.97577808 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 220 7.88e-53   NTclustered gi|2621713090|emb|OY771587.1| 3060593 g3646 i0 80.132 2.17592592592593 302 54 92 6 6 304 3180363 3180065 MAG: Candidatus Cloacimonadales bacterium isolate 1252d336-4e06-4a70-9fd9-88bc0735b540 genome assembly, chromosome: 1 blastn 705 220 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium
14696088 14696088 PRJNA688655_P_NODE_16432_length_241_cov_0.916667_g16367_i0 PRJNA688655 16432 241 0.916667 2.20916747 Candidatus Cloacimonas sp. 2053534 Bacteria Bacteria 147 7.8e-42   NR MBP9036667.1 2053534 g16367 i0 100 0.921161825726141 74 0 92.1 0 1 222 205 278 MBP9036667.1 trypsin-like peptidase domain-containing protein [Candidatus Cloacimonas sp.] diamond 222 147 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas sp.
21579085 21579085 PRJNA688655_P_NODE_13617_length_244_cov_0.900585_g13552_i0 PRJNA688655 13617 244 0.900585 2.1974274 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 145 7.01e-39   NR MCB5295793.1 2030808 g13552 i0 87.5 0.983606557377049 80 10 98.4 0 242 3 102 181 MCB5295793.1 AMP-binding protein [Candidatus Cloacimonadota bacterium] diamond 240 145 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27208481 27208481 PRJNA688655_P_NODE_8522_length_250_cov_0.870056_g8457_i0 PRJNA688655 8522 250 0.870056 2.17514 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 65.9 2.67e-10   NR PCJ15949.1 2030808 g8457 i0 47.6 4.572 63 32 74.4 1 2 187 313 375 PCJ15949.1 MAG: pantetheine-phosphate adenylyltransferase [Candidatus Cloacimonadota bacterium] diamond 1143 65.9 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27871885 27871885 PRJNA688655_P_NODE_12205_length_246_cov_0.890173_g12140_i0 PRJNA688655 12205 246 0.890173 2.18982558 Candidatus Cloacimonas sp. 2053534 Bacteria Bacteria 172 2.8399999999999994e-52   NR MBP9037476.1 2053534 g12140 i0 100 0.98780487804878 81 0 98.8 0 244 2 34 114 MBP9037476.1 hypothetical protein [Candidatus Cloacimonas sp.] diamond 243 172 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas sp.
29008939 29008939 PRJNA688655_P_NODE_13368_length_244_cov_1.350877_g13303_i0 PRJNA688655 13368 244 1.350877 3.29613988 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 144 1.5899999999999999e-40   NR HNQ44457.1 2030808 g13303 i0 82.5 2.95081967213115 80 14 98.4 0 3 242 88 167 HNQ44457.1 helix-turn-helix domain-containing protein [Candidatus Cloacimonadota bacterium] diamond 720 144 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
29513589 29513589 PRJNA688655_P_NODE_12070_length_246_cov_0.890173_g12005_i0 PRJNA688655 12070 246 0.890173 2.18982558 Candidatus Cloacimonas sp. 2053534 Bacteria Bacteria 174 1.09e-51   NR MCK9157910.1 2053534 g12005 i0 100 1 82 0 100 0 246 1 80 161 MCK9157910.1 hypothetical protein [Candidatus Cloacimonas sp.] diamond 246 174 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas sp.
29766228 29766228 PRJNA688655_P_NODE_15491_length_242_cov_0.911243_g15426_i0 PRJNA688655 15491 242 0.911243 2.20520806 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 105 3.0499999999999998e-24   NR MDD2231229.1 2030808 g15426 i0 70 0.991735537190083 80 24 99.2 0 2 241 563 642 MDD2231229.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 240 105 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30398697 30398697 PRJNA688655_P_NODE_11353_length_247_cov_0.885057_g11288_i0 PRJNA688655 11353 247 0.885057 2.18609079 Candidatus Cloacimonas sp. 2053534 Bacteria Bacteria 125 3.7299999999999998e-31   NR MBP9037728.1 2053534 g11288 i0 100 1.67611336032389 69 0 83.8 0 39 245 68 136 MBP9037728.1 30S ribosomal protein S1 [Candidatus Cloacimonas sp.] diamond 414 125 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas sp.
30745766 30745766 PRJNA688655_P_NODE_1474_length_452_cov_1.187335_g1409_i0 PRJNA688655 1474 452 1.187335 5.3667542 Candidatus Syntrophosphaera sp. 2819277 Bacteria Bacteria 265 1.23e-83   NR HOY85763.1 2819277 g1409 i0 100 0.882743362831858 133 0 88.3 0 53 451 1 133 HOY85763.1 IS21 family transposase [Candidatus Syntrophosphaera sp.] diamond 399 265 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Syntrophosphaera Candidatus Syntrophosphaera sp.
30757343 30757343 PRJNA688655_P_NODE_14514_length_243_cov_0.905882_g14449_i0 PRJNA688655 14514 243 0.905882 2.20129326 Candidatus Cloacimonas 456826 Bacteria Bacteria 162 3.56e-46   NR MDD4677218.1 2030808 g14449 i0 100 2 81 0 100 0 1 243 328 408 MDD4677218.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 486 162 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
31061974 31061974 PRJNA688655_P_NODE_10395_length_248_cov_0.880000_g10330_i0 PRJNA688655 10395 248 0.88 2.1824 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 146 1.57e-41   NR MCB5294993.1 2030808 g10330 i0 87.8 0.991935483870968 82 10 99.2 0 247 2 83 164 MCB5294993.1 IS4 family transposase [Candidatus Cloacimonadota bacterium] diamond 246 146 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
31788813 31788813 PRJNA688655_P_NODE_15137_length_242_cov_0.928994_g15072_i0 PRJNA688655 15137 242 0.928994 2.24816548 Candidatus Syntrophosphaera sp. 2819277 Bacteria Bacteria 67 1.01e-10   NR HOY85763.1 2819277 g15072 i0 68.6 0.632231404958678 51 5 63.2 1 88 240 204 243 HOY85763.1 IS21 family transposase [Candidatus Syntrophosphaera sp.] diamond 153 67 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Syntrophosphaera Candidatus Syntrophosphaera sp.
32705795 32705795 PRJNA688655_P_NODE_1760_length_419_cov_1.907514_g1695_i0 PRJNA688655 1760 419 1.907514 7.99248366 Candidatus Cloacimonas acidaminovorans 456827 Bacteria Bacteria 273 6.3e-90   NR HNV63396.1 456827 g1695 i0 100 0.995226730310263 139 0 99.5 0 419 3 78 216 HNV63396.1 IS1595 family transposase [Candidatus Cloacimonas acidaminovorans] diamond 417 273 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas acidaminovorans

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;