RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA688655", tax_kingdom = "Methanobacteriati" and tax_phylum = "Candidatus Hadarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hadarchaeota · 1 ✖

tax_kingdom 1

  • Methanobacteriati · 1 ✖

bioproject 1

  • PRJNA688655 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29209709 29209709 PRJNA688655_P_NODE_8669_length_250_cov_0.870056_g8604_i0 PRJNA688655 8669 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 105 4.41e-26   NR KUO42154.1 1776334 g8604 i0 62.7 1.98 83 31 99.6 0 250 2 8 90 KUO42154.1 MAG: CMP-N-acetylneuraminic acid synthetase [Candidatus Hadarchaeum yellowstonense] diamond 495 105 1 Archaea   Methanobacteriati Candidatus Hadarchaeota Candidatus Hadarchaeia Candidatus Hadarchaeales Candidatus Hadarchaeaceae Candidatus Hadarchaeum Candidatus Hadarchaeum yellowstonense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;