RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA688655" and tax_kingdom = "Bamfordvirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA688655 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24128825 24128825 PRJNA688655_P_NODE_12399_length_246_cov_0.890173_g12334_i0 PRJNA688655 12399 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 455 1.4500000000000002e-123   NTclustered gi|2288721861|gb|OP218818.1| 10535 g12334 i0 100 100 246 0 100 0 1 246 32179 32424 Unidentified adenovirus strain CHOP Ad5 blastn 24600 455 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
29829461 29829461 PRJNA688655_P_NODE_10911_length_247_cov_0.885057_g10846_i0 PRJNA688655 10911 247 0.885057 2.18609079 Fadolivirus algeromassiliense 3060017 Viruses Viruses 44.7 0.00799   NR YP_010803684.1 3060017 g10846 i0 41.2 1.88259109311741 51 29 60.7 1 241 92 348 398 YP_010803684.1 peptidase C19 ubiquitin carboxyl-terminal hydrolase [Fadolivirus algeromassiliense] diamond 465 44.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
31662347 31662347 PRJNA688655_P_NODE_13097_length_245_cov_0.895349_g13032_i0 PRJNA688655 13097 245 0.895349 2.19360505 Edafosvirus sp. 2487765 Viruses Viruses 102 4.9299999999999996e-24   NR AYV77936.1 2487765 g13032 i0 58.8 0.979591836734694 80 33 98 0 3 242 61 140 AYV77936.1 MAG: GTP binding translation elongation factor [Edafosvirus sp.] diamond 240 102 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;