RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA688655", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA688655 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26702215 26702215 PRJNA688655_P_NODE_14341_length_243_cov_0.905882_g14276_i0 PRJNA688655 14341 243 0.905882 2.20129326 Chlamydiota bacterium 2081524 Bacteria Bacteria 92.8 2.11e-20   NR MCX6991089.1 2081524 g14276 i0 56.6 1.02469135802469 83 34 100 1 1 243 141 223 MCX6991089.1 Kdo hydroxylase family protein [Chlamydiota bacterium] diamond 249 92.8 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31472900 31472900 PRJNA688655_P_NODE_15616_length_242_cov_0.911243_g15551_i0 PRJNA688655 15616 242 0.911243 2.20520806 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 144 2.85e-39   NR MBA3602701.1 2052176 g15551 i0 93.8 0.991735537190083 80 5 99.2 0 1 240 272 351 MBA3602701.1 tyrosine transporter [Parachlamydiaceae bacterium] diamond 240 144 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;