RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA688414" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA688414 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
666944 666944 PRJNA688414_P_NODE_1661_length_434_cov_1.512465_g1627_i0 PRJNA688414 1661 434 1.512465 6.5640981 Deinococcus ficus 317577 Bacteria Bacteria 802 0   NTclustered gi|1220362168|gb|CP021081.1| 317577 g1627 i0 100 100.299539170507 434 0 100 0 1 434 26088 26521 Deinococcus ficus strain CC-FR2-10, complete genome blastn 43530 802 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus ficus
18519049 18519049 PRJNA688414_P_NODE_3575_length_315_cov_1.272727_g3541_i0 PRJNA688414 3575 315 1.272727 4.00909005 Deinococcus ficus 317577 Bacteria Bacteria 582 8.459999999999998e-162   NTclustered gi|1220362168|gb|CP021081.1| 317577 g3541 i0 100 480.479365079365 315 0 100 0 1 315 2341744 2342058 Deinococcus ficus strain CC-FR2-10, complete genome blastn 151351 582 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus ficus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;