RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

249 rows where bioproject = "PRJNA688414" and tax_kingdom = "Pseudomonadati"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Pseudomonadati · 249 ✖

bioproject 1

  • PRJNA688414 · 249 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
667005 667005 PRJNA688414_P_NODE_5401_length_264_cov_1.397906_g5367_i0 PRJNA688414 5401 264 1.397906 3.69047184 Alcaligenes faecalis 511 Bacteria Bacteria 477 3.359999999999999e-130   NTclustered gi|2197010343|gb|CP092182.1| 511 g5367 i0 99.242 85.3825757575758 264 2 100 0 1 264 832163 832426 Alcaligenes faecalis strain T17 chromosome, complete genome blastn 22541 477 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Alcaligenes Alcaligenes faecalis
667014 667014 PRJNA688414_P_NODE_5881_length_253_cov_0.866667_g5847_i0 PRJNA688414 5881 253 0.866667 2.19266751 Flavitalea sp. 1909289 Bacteria Bacteria 125 8.89e-35   NR HKH63569.1 1909289 g5847 i0 96.8 0.735177865612648 62 2 73.5 0 251 66 81 142 HKH63569.1 GNAT family N-acetyltransferase [Flavitalea sp.] diamond 186 125 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavitalea Flavitalea sp.
667022 667022 PRJNA688414_P_NODE_6341_length_251_cov_0.876404_g6307_i0 PRJNA688414 6341 251 0.876404 2.19977404 Bradyrhizobium prioriisuperbiae 2854389 Bacteria Bacteria 193 1.28e-44   NTclustered gi|2589062547|gb|CP135921.1| 2854389 g6307 i0 80.632 3.74501992031872 253 45 100 4 1 251 1655735 1655985 Bradyrhizobium prioriisuperbiae strain BL16A chromosome, complete genome blastn 940 193 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium prioriisuperbiae
667026 667026 PRJNA688414_P_NODE_6601_length_250_cov_0.881356_g6567_i0 PRJNA688414 6601 250 0.881356 2.20339 Xanthobacteraceae bacterium 2021379 Bacteria Bacteria 152 9.9e-44   NR MEX2128929.1 2021379 g6567 i0 83.1 0.996 83 14 99.6 0 1 249 57 139 MEX2128929.1 UDP-2,3-diacylglucosamine diphosphatase LpxI [Xanthobacteraceae bacterium] diamond 249 152 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Xanthobacteraceae   Xanthobacteraceae bacterium
667057 667057 PRJNA688414_P_NODE_8081_length_243_cov_0.917647_g8047_i0 PRJNA688414 8081 243 0.917647 2.22988221 Acinetobacter johnsonii 40214 Bacteria Bacteria 309 1.1800000000000002e-79   NTclustered gi|1958298831|gb|CP068187.1| 40214 g8047 i0 94.924 0.810699588477366 197 10 81 0 47 243 1520088 1519892 Acinetobacter johnsonii strain FDAARGOS_1094 chromosome, complete genome blastn 197 309 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter johnsonii
1176845 1176845 PRJNA688414_P_NODE_2381_length_373_cov_2.606667_g2347_i0 PRJNA688414 2381 373 2.606667 9.72286791 Methylophilus 16 Bacteria Bacteria 689 0   NTclustered gi|1525772245|gb|CP033953.1| 17 g2347 i0 100 122.71581769437 373 0 100 0 1 373 2986820 2986448 Methylophilus methylotrophus strain D22 chromosome blastn 45773 689 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylophilus Methylophilus methylotrophus
1176850 1176850 PRJNA688414_P_NODE_4621_length_283_cov_1.238095_g4587_i0 PRJNA688414 4621 283 1.238095 3.50380885 Burkholderiales 80840 Bacteria Bacteria 473 4.699999999999999e-129   NTclustered gi|1646096605|gb|CP031747.1| 511 g4587 i0 97.143 19.3427561837456 280 8 99 0 2 281 275997 276276 Alcaligenes faecalis strain AU14 chromosome blastn 5474 473 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Alcaligenes Alcaligenes faecalis
1176872 1176872 PRJNA688414_P_NODE_8281_length_242_cov_0.923077_g8247_i0 PRJNA688414 8281 242 0.923077 2.23384634 Xanthobacteraceae bacterium 2021379 Bacteria Bacteria 84.3 2.19e-17   NR HKS63050.1 2021379 g8247 i0 77.6 0.607438016528926 49 11 60.7 0 1 147 239 287 HKS63050.1 hypothetical protein [Xanthobacteraceae bacterium] diamond 147 84.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Xanthobacteraceae   Xanthobacteraceae bacterium
1176873 1176873 PRJNA688414_P_NODE_8361_length_242_cov_0.923077_g8327_i0 PRJNA688414 8361 242 0.923077 2.23384634 Burkholderia 32008 Bacteria Bacteria 226 1.2099999999999997e-54   NTclustered gi|2285394396|gb|CP100228.1| 337 g8327 i0 83.817 90.9545454545455 241 35 99 4 1 239 601872 602110 Burkholderia glumae strain SEW1RS chromosome 2, complete sequence blastn 22011 226 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia glumae
1942996 1942996 PRJNA688414_P_NODE_5842_length_253_cov_1.455556_g5808_i0 PRJNA688414 5842 253 1.455556 3.68255668 Alcaligenes faecalis 511 Bacteria Bacteria 462 8.95e-126   NTclustered gi|1973531651|gb|CP023256.1| 511 g5808 i0 99.605 37.897233201581 253 1 100 0 1 253 3748228 3748480 Alcaligenes faecalis strain c16 chromosome, complete genome blastn 9588 462 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Alcaligenes Alcaligenes faecalis
1943006 1943006 PRJNA688414_P_NODE_6442_length_251_cov_0.876404_g6408_i0 PRJNA688414 6442 251 0.876404 2.19977404 Bacteria 2 Bacteria Bacteria 152 6.74e-45   NR HZA54103.1 2665650 g6408 i0 92.5 2.86852589641434 80 6 95.6 0 3 242 104 183 HZA54103.1 (2Fe-2S)-binding protein [Candidatus Udaeobacter sp.] diamond 720 152 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Candidatus Udaeobacter Candidatus Udaeobacter sp.
2452114 2452114 PRJNA688414_P_NODE_6622_length_250_cov_0.881356_g6588_i0 PRJNA688414 6622 250 0.881356 2.20339 Mesorhizobium 68287 Bacteria Bacteria 196 9.88e-46   NTclustered gi|1890486929|gb|CP050296.1| 28104 g6588 i0 83.333 65.444 216 32 86 4 1 214 3373968 3374181 Mesorhizobium huakuii strain 583 chromosome, complete genome blastn 16361 196 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium huakuii
2452115 2452115 PRJNA688414_P_NODE_6822_length_249_cov_0.886364_g6788_i0 PRJNA688414 6822 249 0.886364 2.20704636 Mesorhizobium 68287 Bacteria Bacteria 342 1.1899999999999999e-89   NTclustered gi|1537865400|gb|CP034444.1| 2493669 g6788 i0 91.532 100.012048192771 248 21 99 0 1 248 6682852 6683099 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 chromosome, complete genome blastn 24903 342 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1
3217907 3217907 PRJNA688414_P_NODE_6003_length_253_cov_0.866667_g5969_i0 PRJNA688414 6003 253 0.866667 2.19266751 Bradyrhizobium sp. Ash2021 2954771 Bacteria Bacteria 303 5.74e-78   NTclustered gi|2574021572|gb|CP100604.1| 2954771 g5969 i0 88.627 4.56916996047431 255 22 100 4 1 253 615780 616029 Bradyrhizobium sp. Ash2021 chromosome, complete genome blastn 1156 303 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. Ash2021
3217908 3217908 PRJNA688414_P_NODE_6023_length_253_cov_0.866667_g5989_i0 PRJNA688414 6023 253 0.866667 2.19266751 Lysobacter sp. S4-A87 2925843 Bacteria Bacteria 207 4.63e-49   NTclustered gi|2209984071|gb|CP093341.1| 2925843 g5989 i0 81.961 77.1501976284585 255 37 99 7 2 253 3399516 3399764 Lysobacter sp. S4-A87 chromosome, complete genome blastn 19519 207 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Lysobacter Lysobacter sp. S4-A87
3217932 3217932 PRJNA688414_P_NODE_6863_length_249_cov_0.886364_g6829_i0 PRJNA688414 6863 249 0.886364 2.20704636 Acidobacteriota bacterium 1978231 Bacteria Bacteria 135 1.34e-37   NR MDO8679720.1 1978231 g6829 i0 86.4 0.975903614457831 81 11 97.6 0 245 3 62 142 MDO8679720.1 CDP-alcohol phosphatidyltransferase family protein [Acidobacteriota bacterium] diamond 243 135 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
3217943 3217943 PRJNA688414_P_NODE_7623_length_245_cov_0.906977_g7589_i0 PRJNA688414 7623 245 0.906977 2.22209365 Lysobacter sp. FW306-1B-D06B 3140250 Bacteria Bacteria 298 2.57e-76   NTclustered gi|2720695138|gb|CP151802.1| 3140250 g7589 i0 88.571 10.6897959183673 245 28 100 0 1 245 1842515 1842759 Lysobacter sp. FW306-1B-D06B chromosome, complete genome blastn 2619 298 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Lysobacter Lysobacter sp. FW306-1B-D06B
3728647 3728647 PRJNA688414_P_NODE_6123_length_252_cov_0.871508_g6089_i0 PRJNA688414 6123 252 0.871508 2.19620016 Mesorhizobium 68287 Bacteria Bacteria 52.8 0.023   NTclustered gi|2752389612|gb|CP159253.1| 3228851 g6089 i0 96.774 0.26984126984127 31 1 12 0 119 149 4382965 4382935 Mesorhizobium sp. WSM2240 chromosome, complete genome blastn 68 52.8 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium sp. WSM2240
3728648 3728648 PRJNA688414_P_NODE_6403_length_251_cov_0.876404_g6369_i0 PRJNA688414 6403 251 0.876404 2.19977404 Stenotrophomonas 40323 Bacteria Bacteria 176 1.2899999999999999e-39   NTclustered gi|1050282212|gb|CP016756.1| 83617 g6369 i0 79.518 1.9840637450199201 249 49 99 2 2 249 1379641 1379888 Stenotrophomonas nitritireducens strain 2001, complete genome blastn 498 176 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas nitritireducens
3728650 3728650 PRJNA688414_P_NODE_6903_length_249_cov_0.886364_g6869_i0 PRJNA688414 6903 249 0.886364 2.20704636 Bacteria 2 Bacteria Bacteria 157 8.1e-45   NR TMH64944.1 1891241 g6869 i0 90.2 3.95180722891566 82 8 98.8 0 247 2 200 281 TMH64944.1 MAG: arginine N-succinyltransferase [Betaproteobacteria bacterium] diamond 984 158 0.993670886075949 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria       Betaproteobacteria bacterium
4494882 4494882 PRJNA688414_P_NODE_1984_length_402_cov_1.270517_g1950_i0 PRJNA688414 1984 402 1.270517 5.10747834 Methyloversatilis sp. RAC08 1842540 Bacteria Bacteria 680 0   NTclustered gi|1059487190|gb|CP016448.1| 1842540 g1950 i0 97.27 280.196517412935 403 8 99 3 2 402 843380 843781 Methyloversatilis sp. RAC08 chromosome, complete genome blastn 112639 680 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Sterolibacteriaceae Methyloversatilis Methyloversatilis sp. RAC08
4494958 4494958 PRJNA688414_P_NODE_6124_length_252_cov_0.871508_g6090_i0 PRJNA688414 6124 252 0.871508 2.19620016 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 278 3.46e-70   NTclustered gi|2874254107|emb|OY970192.1| 412054 g6090 i0 88.596 42.4047619047619 228 26 90 0 11 238 4292412 4292639 MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 blastn 10686 278 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
4494969 4494969 PRJNA688414_P_NODE_6604_length_250_cov_0.881356_g6570_i0 PRJNA688414 6604 250 0.881356 2.20339 Bacteria 2 Bacteria Bacteria 150 5.36e-40   NR TMH29895.1 1891241 g6570 i0 92.7 2.952 82 6 98.4 0 3 248 284 365 TMH29895.1 MAG: multidrug efflux RND transporter permease subunit, partial [Betaproteobacteria bacterium] diamond 738 150 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria       Betaproteobacteria bacterium
4494987 4494987 PRJNA688414_P_NODE_7324_length_247_cov_0.896552_g7290_i0 PRJNA688414 7324 247 0.896552 2.21448344 Bauldia sp. 2575872 Bacteria Bacteria 125 1.93e-34   NR MCC6983040.1 2575872 g7290 i0 78 0.995951417004049 82 18 99.6 0 2 247 15 96 MCC6983040.1 DUF2214 domain-containing protein [Bauldia sp.] diamond 246 125 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Kaistiaceae Bauldia Bauldia sp.
4494992 4494992 PRJNA688414_P_NODE_7444_length_246_cov_0.901734_g7410_i0 PRJNA688414 7444 246 0.901734 2.21826564 Ideonella dechloratans 36863 Bacteria Bacteria 385 1.93e-102   NTclustered gi|2160204256|gb|CP088081.1| 36863 g7410 i0 95.122 6.75609756097561 246 9 100 3 1 246 7345 7103 Ideonella dechloratans strain CCUG 30977 chromosome, complete genome blastn 1662 385 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Ideonella Ideonella dechloratans
4495011 4495011 PRJNA688414_P_NODE_8104_length_243_cov_0.917647_g8070_i0 PRJNA688414 8104 243 0.917647 2.22988221 Bacteria 2 Bacteria Bacteria 100 1.9099999999999998e-23   NR MBK6351210.1 1977087 g8070 i0 85.2 3.01234567901235 61 9 75.3 0 60 242 1 61 MBK6351210.1 sulfate ABC transporter permease subunit CysT [Pseudomonadota bacterium] diamond 732 100 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
4495015 4495015 PRJNA688414_P_NODE_8244_length_242_cov_0.923077_g8210_i0 PRJNA688414 8244 242 0.923077 2.23384634 Gemmataceae bacterium 2052164 Bacteria Bacteria 102 4.36e-24   NR HZY90660.1 2052164 g8210 i0 60 3.95454545454545 80 32 99.2 0 242 3 196 275 HZY90660.1 hypothetical protein [Gemmataceae bacterium] diamond 957 102 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
5005224 5005224 PRJNA688414_P_NODE_6664_length_250_cov_0.881356_g6630_i0 PRJNA688414 6664 250 0.881356 2.20339 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 138 3.92e-38   NR HYN06783.1 2910147 g6630 i0 92.8 0.996 83 5 98.4 1 3 248 10 92 HYN06783.1 VWA domain-containing protein [Vicinamibacterales bacterium] diamond 249 138 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
5770640 5770640 PRJNA688414_P_NODE_6005_length_253_cov_0.866667_g5971_i0 PRJNA688414 6005 253 0.866667 2.19266751 Luteitalea pratensis 1855912 Bacteria Bacteria 176 1.31e-39   NTclustered gi|1016914409|gb|CP015136.1| 1855912 g5971 i0 84.066 0.8300395256917 182 29 72 0 70 251 6907418 6907599 Luteitalea pratensis strain DSM 100886 chromosome, complete genome blastn 210 176 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea pratensis
5770675 5770675 PRJNA688414_P_NODE_8105_length_243_cov_0.917647_g8071_i0 PRJNA688414 8105 243 0.917647 2.22988221 Paraburkholderia phenoliruptrix 252970 Bacteria Bacteria 139 1.63e-28   NTclustered gi|2897208386|gb|CP168530.1| 252970 g8071 i0 78.222 25.6337448559671 225 43 91 5 22 243 1723005 1722784 Paraburkholderia phenoliruptrix strain CT11-68 chromosome 2, complete sequence blastn 6229 139 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Paraburkholderia Paraburkholderia phenoliruptrix
5770676 5770676 PRJNA688414_P_NODE_8285_length_242_cov_0.923077_g8251_i0 PRJNA688414 8285 242 0.923077 2.23384634 Hyphomicrobiaceae bacterium 2015799 Bacteria Bacteria 105 3.0799999999999994e-24   NR HEY7550089.1 2015799 g8251 i0 86 0.706611570247934 57 8 70.7 0 241 71 658 714 HEY7550089.1 RHS repeat-associated core domain-containing protein [Hyphomicrobiaceae bacterium] diamond 171 105 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae   Hyphomicrobiaceae bacterium
6280845 6280845 PRJNA688414_P_NODE_8265_length_242_cov_0.923077_g8231_i0 PRJNA688414 8265 242 0.923077 2.23384634 Enterobacter 547 Bacteria Bacteria 442 1.1099999999999995e-119   NTclustered gi|2074955490|gb|CP080107.1| 61645 g8231 i0 99.587 99.0867768595041 242 1 100 0 1 242 4200221 4199980 Enterobacter asburiae strain WW-19C chromosome, complete genome blastn 23979 442 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Enterobacter asburiae
7045643 7045643 PRJNA688414_P_NODE_5986_length_253_cov_0.866667_g5952_i0 PRJNA688414 5986 253 0.866667 2.19266751 Sphingomonas sabuli 2764186 Bacteria Bacteria 235 2.12e-57   NTclustered gi|1898119340|gb|CP060697.1| 2764186 g5952 i0 84.146 49.9446640316206 246 35 96 4 4 247 882615 882858 Sphingomonas sabuli strain sand1-3 chromosome, complete genome blastn 12636 235 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sabuli
7045672 7045672 PRJNA688414_P_NODE_7926_length_244_cov_0.912281_g7892_i0 PRJNA688414 7926 244 0.912281 2.22596564 Sinorhizobium americanum 194963 Bacteria Bacteria 139 1.64e-28   NTclustered gi|1110975261|gb|CP013110.1| 194963 g7892 i0 77.489 0.94672131147541 231 52 95 0 1 231 835294 835524 Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence blastn 231 139 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Sinorhizobium Sinorhizobium americanum
7554758 7554758 PRJNA688414_P_NODE_7286_length_247_cov_0.896552_g7252_i0 PRJNA688414 7286 247 0.896552 2.21448344 Stenotrophomonas 40323 Bacteria Bacteria 451 1.88e-122   NTclustered gi|2235474145|gb|CP080573.1| 40324 g7252 i0 99.595 12.3846153846154 247 1 100 0 1 247 821871 822117 Stenotrophomonas maltophilia strain FZD2 chromosome, complete genome blastn 3059 451 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas maltophilia
7554768 7554768 PRJNA688414_P_NODE_8446_length_235_cov_2.222222_g8412_i0 PRJNA688414 8446 235 2.222222 5.2222217 Methylotenera 359407 Bacteria Bacteria 401 1.8199999999999993e-107   NTclustered gi|507148291|ref|NR_103094.1| 359408 g8412 i0 97.447 283.353191489362 235 6 100 0 1 235 12 246 Methylotenera mobilis strain JLW8 23S ribosomal RNA gene, complete sequence blastn 66588 401 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylotenera Methylotenera mobilis
8320157 8320157 PRJNA688414_P_NODE_6027_length_253_cov_0.866667_g5993_i0 PRJNA688414 6027 253 0.866667 2.19266751 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 153 2.7699999999999994e-42   NR TMJ73233.1 1913988 g5993 i0 89.2 0.984189723320158 83 9 98.4 0 251 3 102 184 TMJ73233.1 MAG: dipeptidase [Alphaproteobacteria bacterium] diamond 249 153 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
8320203 8320203 PRJNA688414_P_NODE_8007_length_243_cov_0.917647_g7973_i0 PRJNA688414 8007 243 0.917647 2.22988221 Bradyrhizobium sp. CCBAU 51753 1325100 Bacteria Bacteria 189 1.6e-43   NTclustered gi|1929531055|gb|CP030037.1| 1325100 g7973 i0 87.059 1.25514403292181 170 18 69 4 76 243 6119874 6120041 Bradyrhizobium sp. CCBAU 51753 chromosome, complete genome blastn 305 189 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. CCBAU 51753
8829781 8829781 PRJNA688414_P_NODE_4747_length_280_cov_1.212560_g4713_i0 PRJNA688414 4747 280 1.21256 3.395168 Paracoccus 265 Bacteria Bacteria 484 2.15e-132   NTclustered gi|2731720636|dbj|AP031493.1| 267 g4713 i0 97.857 179.764285714286 280 6 100 0 1 280 1128662 1128383 MAG: Paracoccus sp. (in: a-proteobacteria) S3_2 DNA, complete genome blastn 50334 484 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Paracoccus Paracoccus sp. (in: a-proteobacteria)
9595523 9595523 PRJNA688414_P_NODE_2548_length_362_cov_1.141869_g2514_i0 PRJNA688414 2548 362 1.141869 4.13356578 Tepidimonas taiwanensis 307486 Bacteria Bacteria 625 1.6099999999999996e-174   NTclustered gi|2102295900|gb|CP083911.1| 307486 g2514 i0 97.79 193.569060773481 362 8 100 0 1 362 2755059 2755420 Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome blastn 70072 625 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Tepidimonas Tepidimonas taiwanensis
9595597 9595597 PRJNA688414_P_NODE_6648_length_250_cov_0.881356_g6614_i0 PRJNA688414 6648 250 0.881356 2.20339 Lysobacter sp. FW306-1B-D06B 3140250 Bacteria Bacteria 152 2.17e-32   NTclustered gi|2720695138|gb|CP151802.1| 3140250 g6614 i0 85.714 8.98 147 18 58 3 106 250 1245643 1245498 Lysobacter sp. FW306-1B-D06B chromosome, complete genome blastn 2245 152 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Lysobacter Lysobacter sp. FW306-1B-D06B
9595629 9595629 PRJNA688414_P_NODE_8328_length_242_cov_0.923077_g8294_i0 PRJNA688414 8328 242 0.923077 2.23384634 Hyphomicrobiaceae bacterium 2015799 Bacteria Bacteria 107 4.36e-26   NR HEY7547900.1 2015799 g8294 i0 65.4 1.00413223140496 81 27 99.2 1 2 241 97 177 HEY7547900.1 protein-disulfide reductase DsbD domain-containing protein [Hyphomicrobiaceae bacterium] diamond 243 107 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae   Hyphomicrobiaceae bacterium
10105479 10105479 PRJNA688414_P_NODE_7928_length_244_cov_0.912281_g7894_i0 PRJNA688414 7928 244 0.912281 2.22596564 Xanthobacteraceae bacterium 2021379 Bacteria Bacteria 129 8.790000000000001e-33   NR HZO46332.1 2021379 g7894 i0 82.5 1.9672131147541 80 14 98.4 0 3 242 278 357 HZO46332.1 Na/Pi cotransporter family protein [Xanthobacteraceae bacterium] diamond 480 129 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Xanthobacteraceae   Xanthobacteraceae bacterium
10871069 10871069 PRJNA688414_P_NODE_5929_length_253_cov_0.866667_g5895_i0 PRJNA688414 5929 253 0.866667 2.19266751 Bacteria 2 Bacteria Bacteria 162 4.93e-47   NR OLC29865.1 1803458 g5895 i0 95.2 2.98814229249012 84 4 99.6 0 2 253 118 201 OLC29865.1 MAG: hypothetical protein AUH28_16445 [Acidobacteria bacterium 13_1_40CM_56_16] diamond 756 163 0.993865030674847 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium 13_1_40CM_56_16
10871082 10871082 PRJNA688414_P_NODE_6869_length_249_cov_0.886364_g6835_i0 PRJNA688414 6869 249 0.886364 2.20704636 Bradyrhizobium sp. LHD-71 3072141 Bacteria Bacteria 78.2 6.47e-15   NR WP_308972166.1 3072141 g6835 i0 64.9 0.686746987951807 57 20 68.7 0 8 178 260 316 WP_308972166.1 sensor histidine kinase [Bradyrhizobium sp. LHD-71] diamond 171 78.2 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. LHD-71
10871086 10871086 PRJNA688414_P_NODE_7129_length_248_cov_0.891429_g7095_i0 PRJNA688414 7129 248 0.891429 2.21074392 Sphaerotilus microaerophilus 2914710 Bacteria Bacteria 265 2.6499999999999997e-66   NTclustered gi|2248185820|dbj|AP025730.1| 2914710 g7095 i0 89.524 57.75 210 21 85 1 13 222 653661 653869 Sphaerotilus sp. FB-5 DNA, complete genome blastn 14322 265 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Sphaerotilus Sphaerotilus microaerophilus
10871094 10871094 PRJNA688414_P_NODE_7449_length_246_cov_0.901734_g7415_i0 PRJNA688414 7449 246 0.901734 2.21826564 Phenylobacterium glaciei 2803784 Bacteria Bacteria 303 5.56e-78   NTclustered gi|1968733457|gb|CP068570.1| 2803784 g7415 i0 89.024 11.9024390243902 246 26 100 1 1 246 2779699 2779455 Phenylobacterium glaciei strain 20VBR1 chromosome, complete genome blastn 2928 303 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Phenylobacterium Phenylobacterium glaciei
12146418 12146418 PRJNA688414_P_NODE_7050_length_248_cov_0.891429_g7016_i0 PRJNA688414 7050 248 0.891429 2.21074392 Bacteria 2 Bacteria Bacteria 167 6.909999999999999e-48   NR MEO5820086.1 2590576 g7016 i0 100 1.98387096774194 82 0 99.2 0 1 246 182 263 MEO5820086.1 DEAD/DEAH box helicase [Vicinamibacteraceae bacterium] diamond 492 167 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae   Vicinamibacteraceae bacterium
12146424 12146424 PRJNA688414_P_NODE_7230_length_247_cov_0.896552_g7196_i0 PRJNA688414 7230 247 0.896552 2.21448344 Bradyrhizobium sp. 170 2782641 Bacteria Bacteria 318 1.9899999999999998e-82   NTclustered gi|2230136781|gb|CP064703.1| 2782641 g7196 i0 92.377 1.08502024291498 223 17 90 0 4 226 2995060 2994838 Bradyrhizobium sp. 170 chromosome, complete genome blastn 268 318 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. 170
12656258 12656258 PRJNA688414_P_NODE_6970_length_248_cov_1.114286_g6936_i0 PRJNA688414 6970 248 1.114286 2.76342928 Bosea 85413 Bacteria Bacteria 442 1.1399999999999995e-119   NTclustered gi|68139156|gb|DQ063123.1| 331860 g6936 i0 98.79 101.923387096774 248 3 100 0 1 248 263 16 Alpha proteobacterium BAL183 16S ribosomal RNA gene, partial sequence blastn 25277 442 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       alpha proteobacterium BAL183
12656260 12656260 PRJNA688414_P_NODE_7310_length_247_cov_0.896552_g7276_i0 PRJNA688414 7310 247 0.896552 2.21448344 Delftia 80865 Bacteria Bacteria 446 8.759999999999998e-121   NTclustered gi|1769913550|gb|CP045291.1| 180282 g7276 i0 99.19 23.9514170040486 247 2 100 0 1 247 4887663 4887909 Delftia tsuruhatensis strain TR1180 chromosome, complete genome blastn 5916 446 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Delftia Delftia tsuruhatensis
12656267 12656267 PRJNA688414_P_NODE_8010_length_243_cov_0.917647_g7976_i0 PRJNA688414 8010 243 0.917647 2.22988221 Bacteria 2 Bacteria Bacteria 164 1.09e-49   NR MBV8240871.1 1909294 g7976 i0 97.5 3.95061728395062 80 2 98.8 0 2 241 47 126 MBV8240871.1 50S ribosomal protein L25/general stress protein Ctc [Hyphomicrobiales bacterium] diamond 960 164 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales     Hyphomicrobiales bacterium
13420952 13420952 PRJNA688414_P_NODE_5991_length_253_cov_0.866667_g5957_i0 PRJNA688414 5991 253 0.866667 2.19266751 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 257 4.5300000000000005e-64   NTclustered gi|2874254091|emb|OY970174.1| 171953 g5957 i0 85.098 1.00790513833992 255 34 100 4 1 253 2700237 2700489 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 255 257 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
13420990 13420990 PRJNA688414_P_NODE_8151_length_243_cov_0.917647_g8117_i0 PRJNA688414 8151 243 0.917647 2.22988221 Planctomycetota bacterium 2026780 Bacteria Bacteria 94.7 1.37e-23   NR MEI7687657.1 2026780 g8117 i0 72.9 0.728395061728395 59 16 72.8 0 243 67 6 64 MEI7687657.1 hypothetical protein [Planctomycetota bacterium] diamond 177 94.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
13930811 13930811 PRJNA688414_P_NODE_7051_length_248_cov_0.891429_g7017_i0 PRJNA688414 7051 248 0.891429 2.21074392 Pseudomonadales bacterium 1891229 Bacteria Bacteria 146 7.05e-39   NR HET6472135.1 1891229 g7017 i0 79 0.979838709677419 81 17 98 0 243 1 514 594 HET6472135.1 PEGA domain-containing protein [Pseudomonadales bacterium] diamond 243 146 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales     Pseudomonadales bacterium
14695964 14695964 PRJNA688414_P_NODE_6852_length_249_cov_0.886364_g6818_i0 PRJNA688414 6852 249 0.886364 2.20704636 Bradyrhizobium sp. 170 2782641 Bacteria Bacteria 381 2.5299999999999995e-101   NTclustered gi|2230136781|gb|CP064703.1| 2782641 g6818 i0 94.694 17.2128514056225 245 13 98 0 3 247 5855263 5855019 Bradyrhizobium sp. 170 chromosome, complete genome blastn 4286 381 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. 170
14695969 14695969 PRJNA688414_P_NODE_7172_length_247_cov_0.896552_g7138_i0 PRJNA688414 7172 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 131 1.9e-34   NR HJU74115.1 2026741 g7138 i0 90.1 2.58704453441296 71 7 86.2 0 2 214 349 419 HJU74115.1 amidohydrolase family protein [Gemmatimonadaceae bacterium] diamond 639 132 0.992424242424242 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
14695975 14695975 PRJNA688414_P_NODE_7532_length_246_cov_0.901734_g7498_i0 PRJNA688414 7532 246 0.901734 2.21826564 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 63.2 8.17e-10   NR HEY8712550.1 2651171 g7498 i0 92.1 0.463414634146341 38 3 46.3 0 9 122 174 211 HEY8712550.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 114 63.2 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
14695978 14695978 PRJNA688414_P_NODE_7672_length_245_cov_0.906977_g7638_i0 PRJNA688414 7672 245 0.906977 2.22209365 Brucella intermedia 94625 Bacteria Bacteria 126 1.28e-24   NTclustered gi|2495970521|gb|CP123057.1| 94625 g7638 i0 92.135 8.02857142857143 89 7 36 0 157 245 231359 231447 Brucella intermedia strain TSBOI chromosome 2, complete sequence blastn 1967 126 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Brucellaceae Brucella Brucella intermedia
14695996 14695996 PRJNA688414_P_NODE_8352_length_242_cov_0.923077_g8318_i0 PRJNA688414 8352 242 0.923077 2.23384634 uncultured Roseateles sp. 452440 Bacteria Bacteria 195 3.42e-45   NTclustered gi|2575803384|emb|OY729424.1| 452440 g8318 i0 81.25 35.8140495867769 240 45 99 0 1 240 4751705 4751466 MAG: uncultured Paucibacter sp. isolate 16becde1-7ee0-41cf-90b4-78e093466c12 genome assembly, chromosome: 1 blastn 8667 195 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles uncultured Roseateles sp.
15205492 15205492 PRJNA688414_P_NODE_6072_length_252_cov_1.307263_g6038_i0 PRJNA688414 6072 252 1.307263 3.29430276 Pseudomonadota 1224 Bacteria Bacteria 460 3.2e-125   NTclustered gi|2103567975|gb|OK326642.1| 479 g6038 i0 99.605 103.40873015873 253 0 100 1 1 252 440 692 Moraxella sp. strain Y2-U-1 16S ribosomal RNA gene, partial sequence blastn 26059 460 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Moraxella Moraxella sp.
15969695 15969695 PRJNA688414_P_NODE_5113_length_271_cov_1.060606_g5079_i0 PRJNA688414 5113 271 1.060606 2.87424226 Alcaligenes faecalis 511 Bacteria Bacteria 496 9.55e-136   NTclustered gi|1973531651|gb|CP023256.1| 511 g5079 i0 99.631 60.9557195571956 271 1 100 0 1 271 791917 791647 Alcaligenes faecalis strain c16 chromosome, complete genome blastn 16519 496 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Alcaligenes Alcaligenes faecalis
15969712 15969712 PRJNA688414_P_NODE_5893_length_253_cov_0.866667_g5859_i0 PRJNA688414 5893 253 0.866667 2.19266751 Piscinibacter gummiphilus 946333 Bacteria Bacteria 169 2.1799999999999996e-37   NTclustered gi|1275594026|gb|CP024645.1| 946333 g5859 i0 80.631 88.1304347826087 222 39 87 4 16 235 4335757 4335538 Piscinibacter gummiphilus strain NBRC 109400 chromosome, complete genome blastn 22297 169 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Piscinibacter Piscinibacter gummiphilus
15969718 15969718 PRJNA688414_P_NODE_6233_length_252_cov_0.871508_g6199_i0 PRJNA688414 6233 252 0.871508 2.19620016 Xanthobacteraceae bacterium 2021379 Bacteria Bacteria 162 1.08e-46   NR HYY36243.1 2021379 g6199 i0 96.4 1.97619047619048 83 3 98.8 0 2 250 47 129 HYY36243.1 isocitrate/isopropylmalate family dehydrogenase [Xanthobacteraceae bacterium] diamond 498 162 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Xanthobacteraceae   Xanthobacteraceae bacterium
15969724 15969724 PRJNA688414_P_NODE_6613_length_250_cov_0.881356_g6579_i0 PRJNA688414 6613 250 0.881356 2.20339 Aquibium microcysteis 675281 Bacteria Bacteria 307 4.3800000000000005e-79   NTclustered gi|1899880081|gb|CP061080.1| 675281 g6579 i0 88.8 91.3 250 28 100 0 1 250 6025369 6025618 Aquibium microcysteis strain NIBR3 chromosome, complete genome blastn 22825 307 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Aquibium Aquibium microcysteis
15969728 15969728 PRJNA688414_P_NODE_6813_length_249_cov_0.886364_g6779_i0 PRJNA688414 6813 249 0.886364 2.20704636 Bradyrhizobium guangzhouense 1325095 Bacteria Bacteria 399 6.989999999999999e-107   NTclustered gi|1562497345|gb|CP030053.1| 1325095 g6779 i0 95.582 13.0160642570281 249 11 100 0 1 249 1577749 1577501 Bradyrhizobium guangzhouense strain CCBAU 51670 chromosome, complete genome blastn 3241 399 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium guangzhouense
15969735 15969735 PRJNA688414_P_NODE_7053_length_248_cov_0.891429_g7019_i0 PRJNA688414 7053 248 0.891429 2.21074392 Gammaproteobacteria bacterium SG8_31 1703405 Bacteria Bacteria 134 8.48e-35   NR KPK60642.1 1703405 g7019 i0 81.7 1.98387096774194 82 15 99.2 0 1 246 55 136 KPK60642.1 MAG: CTP synthase [Gammaproteobacteria bacterium SG8_31] diamond 492 134 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium SG8_31
15969741 15969741 PRJNA688414_P_NODE_7393_length_246_cov_0.901734_g7359_i0 PRJNA688414 7393 246 0.901734 2.21826564 Pendulispora brunnea 2905690 Bacteria Bacteria 165 2.74e-36   NTclustered gi|2698055994|gb|CP089982.1| 2905690 g7359 i0 79.661 3.76829268292683 236 43 95 4 14 246 10383962 10383729 Pendulispora brunnea strain MSr12523 chromosome, complete genome blastn 927 165 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora brunnea
15969749 15969749 PRJNA688414_P_NODE_7733_length_245_cov_0.906977_g7699_i0 PRJNA688414 7733 245 0.906977 2.22209365 Mesorhizobium albiziae 335020 Bacteria Bacteria 164 1.2299999999999999e-47   NR WP_149759917.1 335020 g7699 i0 97.5 1.98367346938776 81 2 99.2 0 1 243 266 346 WP_149759917.1 deoxyribose-phosphate aldolase [Mesorhizobium albiziae] diamond 486 164 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Neomesorhizobium Neomesorhizobium albiziae
17244990 17244990 PRJNA688414_P_NODE_6674_length_250_cov_0.881356_g6640_i0 PRJNA688414 6674 250 0.881356 2.20339 Bradyrhizobium sp. NP1 3049772 Bacteria Bacteria 261 3.4600000000000002e-65   NTclustered gi|2529304879|gb|CP127385.1| 3049772 g6640 i0 87.013 4.744 231 30 92 0 11 241 862153 861923 Bradyrhizobium sp. NP1 chromosome, complete genome blastn 1186 261 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. NP1
17245005 17245005 PRJNA688414_P_NODE_7634_length_245_cov_0.906977_g7600_i0 PRJNA688414 7634 245 0.906977 2.22209365 uncultured Alphaproteobacteria bacterium 91750 Bacteria Bacteria 231 2.65e-56   NTclustered gi|2874253972|emb|OY970297.1| 91750 g7600 i0 84.211 15.465306122449 247 29 99 8 4 245 429406 429647 MAG: uncultured Alphaproteobacteria bacterium isolate MFD05747.bin.2.145 genome assembly, chromosome: 1 blastn 3789 231 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       uncultured Alphaproteobacteria bacterium
17754667 17754667 PRJNA688414_P_NODE_6834_length_249_cov_0.886364_g6800_i0 PRJNA688414 6834 249 0.886364 2.20704636 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 173 2.74e-50   NR HKO82294.1 1869212 g6800 i0 95.2 5 83 4 100 0 1 249 226 308 HKO82294.1 2-oxoacid:acceptor oxidoreductase subunit alpha [Chitinophagaceae bacterium] diamond 1245 173 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
17754673 17754673 PRJNA688414_P_NODE_7334_length_247_cov_0.862069_g7300_i0 PRJNA688414 7334 247 0.862069 2.12931043 Bradyrhizobium 374 Bacteria Bacteria 191 4.53e-44   NTclustered gi|2645013916|gb|CP138298.1| 375 g7300 i0 80.567 22.8016194331984 247 48 100 0 1 247 5675679 5675925 Bradyrhizobium japonicum strain CNPSo 24 chromosome, complete genome blastn 5632 191 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium japonicum
18519092 18519092 PRJNA688414_P_NODE_6035_length_253_cov_0.866667_g6001_i0 PRJNA688414 6035 253 0.866667 2.19266751 Methylocapsa sp. D3K7 3041435 Bacteria Bacteria 158 4.729999999999999e-34   NTclustered gi|2495964350|gb|CP123229.1| 3041435 g6001 i0 86.207 55.5770750988142 145 20 57 0 62 206 2223231 2223087 Methylocapsa sp. D3K7 chromosome, complete genome blastn 14061 158 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Beijerinckiaceae Methylocapsa Methylocapsa sp. D3K7
18519095 18519095 PRJNA688414_P_NODE_6115_length_252_cov_0.871508_g6081_i0 PRJNA688414 6115 252 0.871508 2.19620016 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 164 9.79e-49   NR HJX98481.1 2201154 g6081 i0 97.6 2.96428571428571 83 2 98.8 0 3 251 149 231 HJX98481.1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Chthoniobacterales bacterium] diamond 747 164 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
18519115 18519115 PRJNA688414_P_NODE_7135_length_248_cov_0.862857_g7101_i0 PRJNA688414 7135 248 0.862857 2.13988536 Brevundimonas nasdae 172043 Bacteria Bacteria 372 1.52e-98   NTclustered gi|2074062169|gb|CP080036.1| 172043 g7101 i0 93.902 3.95161290322581 246 15 99 0 3 248 2742183 2741938 Brevundimonas nasdae strain A30 chromosome, complete genome blastn 980 372 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Brevundimonas Brevundimonas nasdae
18519121 18519121 PRJNA688414_P_NODE_7295_length_247_cov_0.896552_g7261_i0 PRJNA688414 7295 247 0.896552 2.21448344 Bradyrhizobium sp. TZ2 3350099 Bacteria Bacteria 344 3.29e-90   NTclustered gi|2830901081|gb|CP170752.1| 3350099 g7261 i0 92.5 46.9878542510121 240 18 97 0 1 240 864823 865062 Bradyrhizobium sp. TZ2 chromosome, complete genome blastn 11606 344 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. TZ2
18519126 18519126 PRJNA688414_P_NODE_7615_length_245_cov_0.906977_g7581_i0 PRJNA688414 7615 245 0.906977 2.22209365 Blastocatellia bacterium 2052146 Bacteria Bacteria 160 2.2e-43   NR HEY3135195.1 2052146 g7581 i0 93.8 4.95918367346939 81 5 99.2 0 2 244 290 370 HEY3135195.1 glucoamylase family protein [Blastocatellia bacterium] diamond 1215 160 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
18519141 18519141 PRJNA688414_P_NODE_8315_length_242_cov_0.923077_g8281_i0 PRJNA688414 8315 242 0.923077 2.23384634 Pseudoxanthomonas suwonensis 314722 Bacteria Bacteria 342 1.16e-89   NTclustered gi|807383831|gb|CP011144.1| 314722 g8281 i0 92.149 2.92148760330579 242 19 100 0 1 242 1025204 1025445 Pseudoxanthomonas suwonensis strain J1, complete genome blastn 707 342 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Pseudoxanthomonas Pseudoxanthomonas suwonensis
19028529 19028529 PRJNA688414_P_NODE_7255_length_247_cov_0.896552_g7221_i0 PRJNA688414 7255 247 0.896552 2.21448344 Acinetobacter 469 Bacteria Bacteria 457 4.05e-124   NTclustered gi|1934492808|gb|CP059080.1| 40214 g7221 i0 100 35.3724696356275 247 0 100 0 1 247 1070197 1070443 Acinetobacter johnsonii strain E10B chromosome, complete genome blastn 8737 457 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter johnsonii
19793963 19793963 PRJNA688414_P_NODE_7056_length_248_cov_0.891429_g7022_i0 PRJNA688414 7056 248 0.891429 2.21074392 Sphaerotilus sulfidivorans 639200 Bacteria Bacteria 237 5.77e-58   NTclustered gi|1735504366|gb|CP035708.1| 639200 g7022 i0 84 2.9758064516129 250 36 100 4 1 248 3087213 3086966 Sphaerotilus sulfidivorans strain D-507 chromosome, complete genome blastn 738 237 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Sphaerotilus Sphaerotilus sulfidivorans
19793977 19793977 PRJNA688414_P_NODE_7696_length_245_cov_0.906977_g7662_i0 PRJNA688414 7696 245 0.906977 2.22209365 Singulisphaera acidiphila 466153 Bacteria Bacteria 84.2 7.84e-12   NTclustered gi|430012750|gb|CP003364.1| 886293 g7662 i0 89.394 0.269387755102041 66 7 27 0 58 123 9502867 9502802 Singulisphaera acidiphila DSM 18658, complete genome blastn 66 84.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Singulisphaera Singulisphaera acidiphila
19793978 19793978 PRJNA688414_P_NODE_7716_length_245_cov_0.906977_g7682_i0 PRJNA688414 7716 245 0.906977 2.22209365 Skermanella mucosa 1789672 Bacteria Bacteria 241 4.400000000000001e-59   NTclustered gi|2130786708|gb|CP086106.1| 1789672 g7682 i0 84.49 9.35510204081633 245 37 99 1 1 244 4773378 4773134 Skermanella mucosa strain KEMB 2255-438 chromosome SKMUc, complete sequence blastn 2292 241 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales Azospirillaceae Skermanella Skermanella mucosa
19793986 19793986 PRJNA688414_P_NODE_8176_length_243_cov_0.917647_g8142_i0 PRJNA688414 8176 243 0.917647 2.22988221 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 121 1.19e-30   NR HTH00798.1 2910147 g8142 i0 81 1.97530864197531 79 15 97.5 0 237 1 50 128 HTH00798.1 ABC transporter permease [Vicinamibacterales bacterium] diamond 480 121 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
20303217 20303217 PRJNA688414_P_NODE_4976_length_274_cov_1.552239_g4942_i0 PRJNA688414 4976 274 1.552239 4.25313486 Paracoccaceae 31989 Bacteria Bacteria 507 4.47e-139   NTclustered gi|2745090301|gb|PP930905.1| 267 g4942 i0 100 101.78102189781 274 0 100 0 1 274 3 276 Paracoccus sp. (in: a-proteobacteria) strain C5 16S ribosomal RNA gene, partial sequence blastn 27888 507 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Paracoccus Paracoccus sp. (in: a-proteobacteria)
21069375 21069375 PRJNA688414_P_NODE_1597_length_441_cov_1.413043_g1563_i0 PRJNA688414 1597 441 1.413043 6.23151963 Undibacterium sp. YM2 2058625 Bacteria Bacteria 778 0   NTclustered gi|1798099803|dbj|AP018441.1| 2058625 g1563 i0 98.853 490.798185941043 436 5 99 0 5 440 1530760 1530325 Undibacterium sp. YM2 DNA, complete genome blastn 216442 778 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium sp. YM2
21069456 21069456 PRJNA688414_P_NODE_6457_length_251_cov_0.876404_g6423_i0 PRJNA688414 6457 251 0.876404 2.19977404 Halorhodospira halophila 1053 Bacteria Bacteria 222 1.64e-53   NTclustered gi|121588215|gb|CP000544.1| 349124 g6423 i0 83.333 42.7450199203187 246 35 97 5 9 251 254093 253851 Halorhodospira halophila SL1, complete genome blastn 10729 222 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Ectothiorhodospiraceae Halorhodospira Halorhodospira halophila
21069464 21069464 PRJNA688414_P_NODE_6717_length_249_cov_1.670455_g6683_i0 PRJNA688414 6717 249 1.670455 4.15943295 Paraburkholderia fungorum 134537 Bacteria Bacteria 455 1.47e-123   NTclustered gi|1865490366|gb|CP028829.1| 134537 g6683 i0 99.598 19.1807228915663 249 1 100 0 1 249 3202799 3202551 Paraburkholderia fungorum strain UM_TBK chromosome 1 blastn 4776 455 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Paraburkholderia Paraburkholderia fungorum
21069477 21069477 PRJNA688414_P_NODE_7497_length_246_cov_0.901734_g7463_i0 PRJNA688414 7497 246 0.901734 2.21826564 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 100 2.48e-22   NR HKF45341.1 2651171 g7463 i0 62.2 5.34146341463415 82 30 98.8 1 2 244 277 358 HKF45341.1 protein kinase [Thermoanaerobaculia bacterium] diamond 1314 100 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
21069491 21069491 PRJNA688414_P_NODE_8337_length_242_cov_0.923077_g8303_i0 PRJNA688414 8337 242 0.923077 2.23384634 Rhodospirillales bacterium 2026786 Bacteria Bacteria 303 5.45e-78   NTclustered gi|2621711936|emb|OY770024.1| 2026786 g8303 i0 89.831 38.0537190082645 236 24 98 0 7 242 444751 444516 MAG: Rhodospirillales bacterium isolate f6e2be23-8832-45e3-9f96-a03639f77de9 genome assembly, chromosome: 1 blastn 9209 303 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales     Rhodospirillales bacterium
21579063 21579063 PRJNA688414_P_NODE_7697_length_245_cov_0.906977_g7663_i0 PRJNA688414 7697 245 0.906977 2.22209365 Stenotrophomonas 40323 Bacteria Bacteria 453 5.1900000000000006e-123   NTclustered gi|2235474145|gb|CP080573.1| 40324 g7663 i0 100 100.510204081633 245 0 100 0 1 245 1370782 1371026 Stenotrophomonas maltophilia strain FZD2 chromosome, complete genome blastn 24625 453 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas maltophilia
21579070 21579070 PRJNA688414_P_NODE_8497_length_228_cov_2.012903_g8463_i0 PRJNA688414 8497 228 2.012903 4.5894188400000004 Stenotrophomonas 40323 Bacteria Bacteria 422 1.34e-113   NTclustered gi|2307904090|gb|CP104290.1| 40324 g8463 i0 100 325.916666666667 228 0 100 0 1 228 395833 396060 Stenotrophomonas maltophilia strain ACYCa.6E chromosome, complete genome blastn 74309 422 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas maltophilia
22344353 22344353 PRJNA688414_P_NODE_7218_length_247_cov_0.896552_g7184_i0 PRJNA688414 7218 247 0.896552 2.21448344 Afipia dichlorophenoxyacetatis 3116917 Bacteria Bacteria 333 7.119999999999999e-87   NTclustered gi|2677431774|dbj|AP029255.1| 3116917 g7184 i0 91.057 98.753036437247 246 22 99 0 1 246 1142047 1141802 Afipia dichlorophenoxyacetatis DDX28 DNA, complete genome blastn 24392 333 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia dichlorophenoxyacetatis
22344354 22344354 PRJNA688414_P_NODE_7298_length_247_cov_0.896552_g7264_i0 PRJNA688414 7298 247 0.896552 2.21448344 Croceibacterium sp. 2676757 Bacteria Bacteria 61.2 2.03e-9   NR HEU4649863.1 2676757 g7264 i0 100 0.352226720647773 29 0 35.2 0 246 160 131 159 HEU4649863.1 MarR family winged helix-turn-helix transcriptional regulator [Croceibacterium sp.] diamond 87 61.2 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Croceibacterium Croceibacterium sp.
22854196 22854196 PRJNA688414_P_NODE_2598_length_358_cov_3.838596_g2564_i0 PRJNA688414 2598 358 3.838596 13.74217368 Moraxellaceae 468 Bacteria Bacteria 658 0   NTclustered gi|1985959268|gb|CP069437.1| 34062 g2564 i0 100 367.08938547486 356 0 99 0 3 358 1496419 1496774 Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome blastn 131418 658 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Faucicola Faucicola osloensis
23619801 23619801 PRJNA688414_P_NODE_2979_length_339_cov_1.526316_g2945_i0 PRJNA688414 2979 339 1.526316 5.17421124 Diaphorobacter sp. HDW4B 2714925 Bacteria Bacteria 545 1.1999999999999999e-150   NTclustered gi|1821221231|gb|CP049905.1| 2714925 g2945 i0 95.627 383.616519174041 343 9 100 6 1 339 934009 934349 Diaphorobacter sp. HDW4B chromosome, complete genome blastn 130046 545 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Diaphorobacter Diaphorobacter sp. HDW4B
23619895 23619895 PRJNA688414_P_NODE_8339_length_242_cov_0.923077_g8305_i0 PRJNA688414 8339 242 0.923077 2.23384634 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 161 7.22e-46   NR MDB5338058.1 2026779 g8305 i0 91.3 0.991735537190083 80 7 99.2 0 2 241 38 117 MDB5338058.1 glucose-phosphate adenylyltransferase [Planctomycetaceae bacterium] diamond 240 161 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
24128771 24128771 PRJNA688414_P_NODE_1219_length_493_cov_3.342857_g1185_i0 PRJNA688414 1219 493 3.342857 16.48028501 Variovorax 34072 Bacteria Bacteria 773 0   NTclustered gi|1972901683|gb|CP063167.1| 34073 g1185 i0 94.949 203.864097363083 495 21 100 4 1 493 488146 488638 Variovorax paradoxus strain VAI-C plasmid unnamed, complete sequence blastn 100505 773 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Variovorax Variovorax paradoxus
24128789 24128789 PRJNA688414_P_NODE_5199_length_269_cov_1.081633_g5165_i0 PRJNA688414 5199 269 1.081633 2.90959277 Pseudomonadota 1224 Bacteria Bacteria 490 4.409999999999999e-134   NTclustered gi|260066262|gb|GQ891721.1| 65656 g5165 i0 99.627 99.6208178438662 268 1 99 0 2 269 287 20 Hydrogenophaga taeniospiralis strain A 16S ribosomal RNA gene, partial sequence blastn 26798 490 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Hydrogenophaga Hydrogenophaga taeniospiralis
25403360 25403360 PRJNA688414_P_NODE_5960_length_253_cov_0.866667_g5926_i0 PRJNA688414 5960 253 0.866667 2.19266751 Methylobacterium 407 Bacteria Bacteria 100 8.08e-17   NTclustered gi|168192641|gb|CP000943.1| 426117 g5926 i0 84.848 3.51778656126482 99 15 39 0 2 100 307902 307804 Methylobacterium sp. 4-46 chromosome, complete genome blastn 890 100 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. 4-46

Next page

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;