RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA688352" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA688352 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22854094 22854094 PRJNA688352_P_NODE_11958_length_242_cov_0.911243_g11855_i0 PRJNA688352 11958 242 0.911243 2.20520806 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 67 1.01e-10   NR MCX7047382.1 2107588 g11855 i0 69.6 0.570247933884298 46 14 57 0 104 241 7 52 MCX7047382.1 radical SAM protein [Candidatus Sumerlaeota bacterium] diamond 138 67 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
28882193 28882193 PRJNA688352_P_NODE_8208_length_249_cov_0.875000_g8105_i0 PRJNA688352 8208 249 0.875 2.17875 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 123 2.08e-31   NR HPB31204.1 2107588 g8105 i0 75.6 2.96385542168675 82 20 98.8 0 247 2 262 343 HPB31204.1 serine hydroxymethyltransferase [Candidatus Sumerlaeota bacterium] diamond 738 123 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
30156758 30156758 PRJNA688352_P_NODE_9452_length_247_cov_0.873563_g9349_i0 PRJNA688352 9452 247 0.873563 2.15770061 Bacteria 2 Bacteria Bacteria 84 1.17e-16   NR MBN1866279.1 2107588 g9349 i0 74.1 1.90688259109312 54 14 65.6 0 164 3 1 54 MBN1866279.1 excinuclease ABC subunit UvrB [Candidatus Sumerlaeota bacterium] diamond 471 84.3 0.99644128113879 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
31662338 31662338 PRJNA688352_P_NODE_9457_length_247_cov_0.862069_g9354_i0 PRJNA688352 9457 247 0.862069 2.12931043 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 85.9 2.54e-17   NR MBN1868237.1 2107588 g9354 i0 53.6 1.02024291497976 84 36 98.4 2 3 245 916 999 MBN1868237.1 proprotein convertase P-domain-containing protein [Candidatus Sumerlaeota bacterium] diamond 252 85.9 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;