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contig_metadata

11 rows where bioproject = "PRJNA688352" and tax_phylum = "Candidatus Shapironibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Shapironibacteriota · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA688352 · 11 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27208463 27208463 PRJNA688352_P_NODE_5842_length_273_cov_1.510000_g5739_i0 PRJNA688352 5842 273 1.51 4.1223 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 182 2.1599999999999995e-54   NR MBP6891876.1 2053613 g5739 i0 98.9 0.989010989010989 90 1 98.9 0 3 272 267 356 MBP6891876.1 glycosyltransferase family 4 protein [Candidatus Shapirobacteria bacterium] diamond 270 182 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
28945684 28945684 PRJNA688352_P_NODE_7608_length_250_cov_0.870056_g7505_i0 PRJNA688352 7608 250 0.870056 2.17514 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 172 5.01e-53   NR MEL7666339.1 2053613 g7505 i0 100 1.968 82 0 98.4 0 3 248 69 150 MEL7666339.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 492 172 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29166658 29166658 PRJNA688352_P_NODE_7309_length_251_cov_0.865169_g7206_i0 PRJNA688352 7309 251 0.865169 2.17157419 Candidatus Shapirobacteria bacterium CG 2053613 Bacteria Bacteria 114 1.31e-30   NR PIV02188.1 1974880 g7206 i0 71.1 0.99203187250996006 83 24 99.2 0 1 249 13 95 PIV02188.1 MAG: hypothetical protein COS55_00130 [Candidatus Shapirobacteria bacterium CG03_land_8_20_14_0_80_40_19] diamond 249 114 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium CG03_land_8_20_14_0_80_40_19
29292698 29292698 PRJNA688352_P_NODE_10289_length_245_cov_0.895349_g10186_i0 PRJNA688352 10289 245 0.895349 2.19360505 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 160 1.8199999999999993e-46   NR MBP6891522.1 2053613 g10186 i0 98.8 0.991836734693878 81 1 99.2 0 244 2 115 195 MBP6891522.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 243 160 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29292703 29292703 PRJNA688352_P_NODE_2649_length_373_cov_1.026667_g2546_i0 PRJNA688352 2649 373 1.026667 3.82946791 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 232 7.35e-75   NR MBP6891395.1 2053613 g2546 i0 99.2 0.997319034852547 124 1 99.7 0 372 1 116 239 MBP6891395.1 prohibitin family protein [Candidatus Shapirobacteria bacterium] diamond 372 232 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29545209 29545209 PRJNA688352_P_NODE_4790_length_296_cov_1.035874_g4687_i0 PRJNA688352 4790 296 1.035874 3.06618704 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 202 5.499999999999999e-63   NR MBP6891535.1 2053613 g4687 i0 99 0.993243243243243 98 1 99.3 0 295 2 107 204 MBP6891535.1 WecB/TagA/CpsF family glycosyltransferase [Candidatus Shapirobacteria bacterium] diamond 294 202 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29924381 29924381 PRJNA688352_P_NODE_7331_length_251_cov_0.865169_g7228_i0 PRJNA688352 7331 251 0.865169 2.17157419 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 159 3.93e-46   NR MBP6891813.1 2053613 g7228 i0 97.6 0.99203187250996006 83 2 99.2 0 251 3 154 236 MBP6891813.1 DNA-directed RNA polymerase subunit alpha [Candidatus Shapirobacteria bacterium] diamond 249 159 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
30587615 30587615 PRJNA688352_P_NODE_5493_length_280_cov_1.115942_g5390_i0 PRJNA688352 5493 280 1.115942 3.1246376 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 183 1.0599999999999999e-54   NR MBP6891698.1 2053613 g5390 i0 98.9 0.996428571428571 93 1 99.6 0 1 279 275 367 MBP6891698.1 DNA polymerase III subunit beta [Candidatus Shapirobacteria bacterium] diamond 279 183 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
31599403 31599403 PRJNA688352_P_NODE_4036_length_316_cov_1.267490_g3933_i0 PRJNA688352 4036 316 1.26749 4.0052684 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 214 2.7999999999999998e-67   NR MBP6891674.1 2053613 g3933 i0 100 0.996835443037975 105 0 99.7 0 315 1 136 240 MBP6891674.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 315 214 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
32516976 32516976 PRJNA688352_P_NODE_12459_length_241_cov_0.916667_g12356_i0 PRJNA688352 12459 241 0.916667 2.20916747 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 154 2.9799999999999998e-46   NR MBP6891691.1 2053613 g12356 i0 100 0.983402489626556 79 0 98.3 0 3 239 55 133 MBP6891691.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 237 154 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
32548629 32548629 PRJNA688352_P_NODE_4359_length_307_cov_1.200855_g4256_i0 PRJNA688352 4359 307 1.200855 3.68662485 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 122 1.19e-32   NR MBP6891895.1 2053613 g4256 i0 96.8 0.60586319218241 62 2 60.6 0 186 1 1 62 MBP6891895.1 AAA family ATPase [Candidatus Shapirobacteria bacterium] diamond 186 122 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;