RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA688352" and tax_phylum = "Candidatus Saccharimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA688352 · 11 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12146233 12146233 PRJNA688352_P_NODE_10930_length_244_cov_0.900585_g10827_i0 PRJNA688352 10930 244 0.900585 2.1974274 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 156 1.44e-42   NR NCC19628.1 2026720 g10827 i0 96.3 0.983606557377049 80 3 98.4 0 242 3 62 141 NCC19628.1 ATP-dependent DNA helicase RecG [Candidatus Saccharibacteria bacterium] diamond 240 156 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
26670456 26670456 PRJNA688352_P_NODE_9741_length_246_cov_0.890173_g9638_i0 PRJNA688352 9741 246 0.890173 2.18982558 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 96.7 5.219999999999999e-23   NR NCC19907.1 2026720 g9638 i0 100 0.560975609756098 46 0 56.1 0 246 109 63 108 NCC19907.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 138 96.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27903271 27903271 PRJNA688352_P_NODE_9225_length_247_cov_0.885057_g9122_i0 PRJNA688352 9225 247 0.885057 2.18609079 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 88.6 5.22e-19   NR MBR2836755.1 2026720 g9122 i0 58 2.95141700404858 81 34 98.4 0 245 3 167 247 MBR2836755.1 CPBP family intramembrane metalloprotease [Candidatus Saccharibacteria bacterium] diamond 729 88.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28440369 28440369 PRJNA688352_P_NODE_10606_length_244_cov_0.900585_g10503_i0 PRJNA688352 10606 244 0.900585 2.1974274 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 170 1.16e-50   NR NCC20316.1 2026720 g10503 i0 98.8 0.995901639344262 81 1 99.6 0 2 244 180 260 NCC20316.1 rhodanese-related sulfurtransferase [Candidatus Saccharibacteria bacterium] diamond 243 170 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28440377 28440377 PRJNA688352_P_NODE_8726_length_248_cov_0.880000_g8623_i0 PRJNA688352 8726 248 0.88 2.1824 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 153 4.47e-41   NR NCC19467.1 2026720 g8623 i0 98.8 0.991935483870968 82 1 99.2 0 246 1 408 489 NCC19467.1 ATP-dependent helicase [Candidatus Saccharibacteria bacterium] diamond 246 153 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28503418 28503418 PRJNA688352_P_NODE_9767_length_246_cov_0.890173_g9664_i0 PRJNA688352 9767 246 0.890173 2.18982558 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 82.4 3.82e-17   NR MBQ7040997.1 2026720 g9664 i0 76.5 0.621951219512195 51 12 62.2 0 1 153 158 208 MBQ7040997.1 nucleoside monophosphate kinase [Candidatus Saccharibacteria bacterium] diamond 153 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29071903 29071903 PRJNA688352_P_NODE_7688_length_250_cov_0.870056_g7585_i0 PRJNA688352 7688 250 0.870056 2.17514 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 160 1.07e-45   NR NCC20712.1 2026720 g7585 i0 95.2 0.996 83 4 99.6 0 250 2 252 334 NCC20712.1 ribonuclease J [Candidatus Saccharibacteria bacterium] diamond 249 160 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29166655 29166655 PRJNA688352_P_NODE_11149_length_243_cov_0.905882_g11046_i0 PRJNA688352 11149 243 0.905882 2.20129326 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 78.6 1.38e-15   NR HXI01909.1 2973664 g11046 i0 67.9 0.691358024691358 56 18 69.1 0 171 4 148 203 HXI01909.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 168 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
29513572 29513572 PRJNA688352_P_NODE_11210_length_243_cov_0.905882_g11107_i0 PRJNA688352 11210 243 0.905882 2.20129326 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 56.2 2.04e-7   NR HZM03687.1 2973664 g11107 i0 41.2 0.839506172839506 68 40 84 0 29 232 1 68 HZM03687.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 204 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30714101 30714101 PRJNA688352_P_NODE_8854_length_248_cov_0.880000_g8751_i0 PRJNA688352 8854 248 0.88 2.1824 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 159 3.3399999999999997e-45   NR MEI6716177.1 2026720 g8751 i0 96.3 0.991935483870968 82 3 99.2 0 246 1 229 310 MEI6716177.1 LPXTG cell wall anchor domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 246 159 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31124506 31124506 PRJNA688352_P_NODE_2755_length_367_cov_1.047619_g2652_i0 PRJNA688352 2755 367 1.047619 3.84476173 Candidatus Saccharimonadaceae bacterium 2830836 Bacteria Bacteria 238 1.2e-76   NR MDD3035672.1 2830836 g2652 i0 100 0.997275204359673 122 0 99.7 0 366 1 94 215 MDD3035672.1 ABC transporter permease [Candidatus Saccharimonadaceae bacterium] diamond 366 238 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae   Candidatus Saccharimonadaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;