RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA688352" and tax_phylum = "Candidatus Omnitrophota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688352 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19793764 19793764 PRJNA688352_P_NODE_10876_length_244_cov_0.900585_g10773_i0 PRJNA688352 10876 244 0.900585 2.1974274 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 133 3.95e-34   NR MEW6235980.1 2035772 g10773 i0 71.3 0.983606557377049 80 23 98.4 0 3 242 147 226 MEW6235980.1 sugar-binding domain-containing protein [Candidatus Omnitrophota bacterium] diamond 240 133 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26607231 26607231 PRJNA688352_P_NODE_10101_length_245_cov_0.895349_g9998_i0 PRJNA688352 10101 245 0.895349 2.19360505 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 125 4.29e-33   NR MFH0754828.1 2035772 g9998 i0 65 0.979591836734694 80 28 98 0 242 3 86 165 MFH0754828.1 inositol monophosphatase family protein [Candidatus Omnitrophota bacterium] diamond 240 125 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27176877 27176877 PRJNA688352_P_NODE_9682_length_246_cov_0.890173_g9579_i0 PRJNA688352 9682 246 0.890173 2.18982558 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 159 1.18e-44   NR MBN1526433.1 2035772 g9579 i0 85.4 3 82 12 100 0 1 246 90 171 MBN1526433.1 homospermidine synthase [Candidatus Omnitrophota bacterium] diamond 738 159 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27398422 27398422 PRJNA688352_P_NODE_11623_length_242_cov_0.911243_g11520_i0 PRJNA688352 11623 242 0.911243 2.20520806 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 98.2 3.37e-23   NR MFA5144257.1 2035772 g11520 i0 79.7 4.38842975206612 59 12 73.1 0 178 2 1 59 MFA5144257.1 aromatic aminobenezylarsenical efflux permease ArsG family transporter [Candidatus Omnitrophota bacterium] diamond 1062 98.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27524587 27524587 PRJNA688352_P_NODE_11703_length_242_cov_0.911243_g11600_i0 PRJNA688352 11703 242 0.911243 2.20520806 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 78.2 1.21e-14   NR MDD5347013.1 2035772 g11600 i0 53.6 0.855371900826446 69 32 85.5 0 1 207 639 707 MDD5347013.1 response regulator [Candidatus Omnitrophota bacterium] diamond 207 78.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27651030 27651030 PRJNA688352_P_NODE_7604_length_250_cov_0.870056_g7501_i0 PRJNA688352 7604 250 0.870056 2.17514 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 86.7 1.82e-19   NR MCB9783662.1 2035772 g7501 i0 64.6 2.352 65 23 78 0 51 245 1 65 MCB9783662.1 type II toxin-antitoxin system VapC family toxin [Candidatus Omnitrophota bacterium] diamond 588 86.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28629898 28629898 PRJNA688352_P_NODE_7727_length_250_cov_0.870056_g7624_i0 PRJNA688352 7727 250 0.870056 2.17514 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 105 2.15e-25   NR MFA5159095.1 2035772 g7624 i0 86.9 3.66 61 7 73.2 1 2 184 212 271 MFA5159095.1 FtsQ-type POTRA domain-containing protein [Candidatus Omnitrophota bacterium] diamond 915 105 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29008922 29008922 PRJNA688352_P_NODE_11768_length_242_cov_0.911243_g11665_i0 PRJNA688352 11768 242 0.911243 2.20520806 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 144 2.3299999999999998e-38   NR MCA9423946.1 2035772 g11665 i0 78.8 0.991735537190083 80 17 99.2 0 242 3 319 398 MCA9423946.1 MCE family protein [Candidatus Omnitrophota bacterium] diamond 240 144 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29103454 29103454 PRJNA688352_P_NODE_9248_length_247_cov_0.885057_g9145_i0 PRJNA688352 9248 247 0.885057 2.18609079 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 101 1.9099999999999998e-23   NR MDD5156226.1 2035772 g9145 i0 92 9.7165991902834 50 4 60.7 0 1 150 285 334 MDD5156226.1 aspartate-semialdehyde dehydrogenase [Candidatus Omnitrophota bacterium] diamond 2400 101 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29608105 29608105 PRJNA688352_P_NODE_8910_length_248_cov_0.880000_g8807_i0 PRJNA688352 8910 248 0.88 2.1824 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 159 3.68e-45   NR MDD5422182.1 2035772 g8807 i0 95.1 4.95967741935484 82 4 99.2 0 3 248 311 392 MDD5422182.1 phosphoglycerate kinase [Candidatus Omnitrophota bacterium] diamond 1230 159 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30935413 30935413 PRJNA688352_P_NODE_10554_length_244_cov_0.900585_g10451_i0 PRJNA688352 10554 244 0.900585 2.1974274 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 147 4.07e-39   NR MDD5156125.1 2035772 g10451 i0 91.4 6.97131147540984 81 7 99.6 0 244 2 317 397 MDD5156125.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Candidatus Omnitrophota bacterium] diamond 1701 147 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32548636 32548636 PRJNA688352_P_NODE_9779_length_246_cov_0.890173_g9676_i0 PRJNA688352 9779 246 0.890173 2.18982558 Candidatus Omnitrophica bacterium ADurb.Bin2 2035772 Bacteria Bacteria 128 3.76e-35   NR OQB11197.1 1852852 g9676 i0 93 3.5 71 5 86.6 0 22 234 1 71 OQB11197.1 MAG: LexA repressor [Candidatus Omnitrophica bacterium ADurb.Bin205] diamond 861 128 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophica bacterium ADurb.Bin205
32768763 32768763 PRJNA688352_P_NODE_8780_length_248_cov_0.880000_g8677_i0 PRJNA688352 8780 248 0.88 2.1824 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 120 4.25e-30   NR MFC1666681.1 2035772 g8677 i0 70 0.967741935483871 80 24 96.8 0 2 241 134 213 MFC1666681.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 240 120 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;