RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA688352" and tax_phylum = "Candidatus Nealsoniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nealsoniibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA688352 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30745748 30745748 PRJNA688352_P_NODE_11394_length_243_cov_0.905882_g11291_i0 PRJNA688352 11394 243 0.905882 2.20129326 Candidatus Nealsonbacteria bacterium 2093793 Bacteria Bacteria 78.6 8.86e-15   NR NQU25442.1 2093793 g11291 i0 62.8 1.92592592592593 78 28 96.3 1 236 3 103 179 NQU25442.1 PEP-CTERM sorting domain-containing protein [Candidatus Nealsonbacteria bacterium] diamond 468 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Nealsoniibacteriota         Candidatus Nealsonbacteria bacterium
32243892 32243892 PRJNA688352_P_NODE_10538_length_244_cov_0.900585_g10435_i0 PRJNA688352 10538 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 142 1.99e-39   NR NQU21858.1 2093793 g10435 i0 82.7 6.97131147540984 81 14 99.6 0 2 244 51 131 NQU21858.1 ornithine carbamoyltransferase [Candidatus Nealsonbacteria bacterium] diamond 1701 142 1 Bacteria Bacteria candidate phyla   Candidatus Nealsoniibacteriota         Candidatus Nealsonbacteria bacterium
32580167 32580167 PRJNA688352_P_NODE_11199_length_243_cov_0.905882_g11096_i0 PRJNA688352 11199 243 0.905882 2.20129326 Candidatus Nealsonbacteria bacterium 2093793 Bacteria Bacteria 44.7 0.00773   NR MFH1841406.1 2093793 g11096 i0 52.5 2.34567901234568 40 19 49.4 0 241 122 692 731 MFH1841406.1 O-antigen ligase family protein [Candidatus Nealsonbacteria bacterium] diamond 570 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Nealsoniibacteriota         Candidatus Nealsonbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;