RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA688352" and tax_phylum = "Candidatus Fermentibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fermentibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA688352 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29829450 29829450 PRJNA688352_P_NODE_7751_length_250_cov_0.870056_g7648_i0 PRJNA688352 7751 250 0.870056 2.17514 Candidatus Fermentibacterota bacterium 2044591 Bacteria Bacteria 52.4 1.04e-6   NR RKZ04137.1 2044591 g7648 i0 51 0.588 49 24 58.8 0 1 147 16 64 RKZ04137.1 MAG: hypothetical protein DRQ25_17310 [Candidatus Fermentibacterota bacterium] diamond 147 52.4 1 Bacteria FCB group Pseudomonadati Candidatus Fermentibacterota         Candidatus Fermentibacterota bacterium
32622887 32622887 PRJNA688352_P_NODE_10640_length_244_cov_0.900585_g10537_i0 PRJNA688352 10640 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 47.8 6.24e-4   NR HPK52681.1 1729713 g10537 i0 47.4 1.40163934426229 57 27 66.4 2 206 45 258 314 HPK52681.1 hypothetical protein [Candidatus Fermentibacter daniensis] diamond 342 47.8 1 Bacteria FCB group Pseudomonadati Candidatus Fermentibacterota Candidatus Fermentibacteria Candidatus Fermentibacterales Candidatus Fermentibacteraceae Candidatus Fermentibacter Candidatus Fermentibacter danicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;