RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA688352", tax_clade = "Sar" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

bioproject 1

  • PRJNA688352 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28598264 28598264 PRJNA688352_P_NODE_9407_length_247_cov_0.885057_g9304_i0 PRJNA688352 9407 247 0.885057 2.18609079 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0211   NR CDW77734.1 5949 g9304 i0 37.1 0.850202429149798 70 40 83.8 3 21 227 1582 1648 CDW77734.1 wd-40 repeat protein [Stylonychia lemnae] diamond 210 43.5 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
31883825 31883825 PRJNA688352_P_NODE_11337_length_243_cov_0.905882_g11234_i0 PRJNA688352 11337 243 0.905882 2.20129326 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00321   NR CAK0841766.1 89957 g11234 i0 39.7 1.4320987654321 58 34 71.6 1 174 1 390 446 CAK0841766.1 unnamed protein product [Polarella glacialis] diamond 348 45.8 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;