RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA688352", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA688352 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27240190 27240190 PRJNA688352_P_NODE_7263_length_251_cov_0.865169_g7160_i0 PRJNA688352 7263 251 0.865169 2.17157419 Minisyncoccota bacterium 2053589 Bacteria Bacteria 102 1.1e-26   NR MDI9407609.1 2053589 g7160 i0 89.7 0.693227091633466 58 6 69.3 0 73 246 2 59 MDI9407609.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 174 102 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27587850 27587850 PRJNA688352_P_NODE_9784_length_246_cov_0.890173_g9681_i0 PRJNA688352 9784 246 0.890173 2.18982558 Minisyncoccota bacterium 2053589 Bacteria Bacteria 75.1 1.53e-15   NR MFA5092295.1 2053589 g9681 i0 85 0.48780487804878 40 6 48.8 0 1 120 49 88 MFA5092295.1 LamG domain-containing protein [Candidatus Paceibacterota bacterium] diamond 120 75.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29260967 29260967 PRJNA688352_P_NODE_10069_length_245_cov_0.895349_g9966_i0 PRJNA688352 10069 245 0.895349 2.19360505 Minisyncoccota bacterium 2053589 Bacteria Bacteria 108 1.93e-25   NR MBP6855807.1 2053589 g9966 i0 65.4 0.991836734693878 81 28 99.2 0 243 1 672 752 MBP6855807.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 243 108 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29576662 29576662 PRJNA688352_P_NODE_11270_length_243_cov_0.905882_g11167_i0 PRJNA688352 11270 243 0.905882 2.20129326 Minisyncoccota bacterium 2053589 Bacteria Bacteria 110 4.64e-27   NR MFA5791774.1 2053589 g11167 i0 72.9 0.864197530864197 70 19 86.4 0 242 33 239 308 MFA5791774.1 DHHA2 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 210 110 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;