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contig_metadata

22 rows where bioproject = "PRJNA685607" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA685607 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3728078 3728078 PRJNA685607_P_NODE_36203_length_310_cov_2.476793_g35844_i0 PRJNA685607 36203 310 2.476793 7.6780583 root 1 Root_unresolved Root_unresolved 80.5 3.51e-17   NR WP_075089093.1 2736 g35844 i0 54.1 18.0677419354839 74 33 70.6 1 236 18 4 77 WP_075089093.1 RNA recognition motif domain-containing protein, partial [Verrucomicrobium spinosum] diamond 5601 80.9 0.995055624227441 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Verrucomicrobium Verrucomicrobium spinosum
14695323 14695323 PRJNA685607_P_NODE_58172_length_263_cov_0.810526_g57813_i0 PRJNA685607 58172 263 0.810526 2.13168338 Ereboglobus luteus 1796921 Bacteria Bacteria 250 7.93e-62   NTclustered gi|1387286769|gb|CP023004.1| 1796921 g57813 i0 83.908 55.254752851711 261 42 99 0 3 263 241368 241628 Ereboglobus luteus strain Ho45, complete genome blastn 14532 250 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Ereboglobus Ereboglobus luteus
27145019 27145019 PRJNA685607_P_NODE_85442_length_244_cov_0.900585_g85083_i0 PRJNA685607 85442 244 0.900585 2.1974274 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 55.5 1.25e-6   NR MBX9578643.1 2201154 g85083 i0 49.1 0.676229508196721 55 28 67.6 0 240 76 438 492 MBX9578643.1 LamG domain-containing protein [Chthoniobacterales bacterium] diamond 165 55.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
27156658 27156658 PRJNA685607_P_NODE_89842_length_243_cov_0.905882_g89483_i0 PRJNA685607 89842 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 48.5 3.47e-4   NR MBN2508489.1 2026799 g89483 i0 40.2 3.82716049382716 82 47 100 2 243 1 56 136 MBN2508489.1 HYR domain-containing protein [Verrucomicrobiota bacterium] diamond 930 48.9 0.991820040899796 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27271860 27271860 PRJNA685607_P_NODE_75643_length_248_cov_0.880000_g75284_i0 PRJNA685607 75643 248 0.88 2.1824 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 115 2.3199999999999997e-30   NR HCN77698.1 2026801 g75284 i0 85.3 0.82258064516129 68 10 82.3 0 3 206 114 181 HCN77698.1 RNA polymerase subunit sigma-24 [Verrucomicrobiales bacterium] diamond 204 115 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
27335246 27335246 PRJNA685607_P_NODE_65263_length_251_cov_0.865169_g64904_i0 PRJNA685607 65263 251 0.865169 2.17157419 Chthoniobacter flavus 191863 Bacteria Bacteria 124 8.489999999999999e-31   NR WP_131989126.1 191863 g64904 i0 78 1.9601593625498 82 17 98 1 248 3 1549 1629 WP_131989126.1 autotransporter domain-containing protein [Chthoniobacter flavus] diamond 492 124 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter flavus
27366978 27366978 PRJNA685607_P_NODE_68763_length_250_cov_0.870056_g68404_i0 PRJNA685607 68763 250 0.870056 2.17514 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 90.1 4.28e-20   NR MES2469889.1 2026799 g68404 i0 88.6 0.528 44 5 52.8 0 132 1 1 44 MES2469889.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 132 90.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27461596 27461596 PRJNA685607_P_NODE_44063_length_290_cov_1.405530_g43704_i0 PRJNA685607 44063 290 1.40553 4.076037 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 71.2 6.35e-12   NR MDD8051452.1 2026799 g43704 i0 40 2.94827586206897 95 53 98.3 3 2 286 91 181 MDD8051452.1 lamin tail domain-containing protein [Verrucomicrobiota bacterium] diamond 855 71.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28535156 28535156 PRJNA685607_P_NODE_84867_length_244_cov_2.233918_g84508_i0 PRJNA685607 84867 244 2.233918 5.45075992 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 53.9 2.04e-6   NR MBG89593.1 2026801 g84508 i0 60 1.40163934426229 40 15 48 1 127 243 1 40 MBG89593.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 342 53.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28787364 28787364 PRJNA685607_P_NODE_53207_length_272_cov_1.190955_g52848_i0 PRJNA685607 53207 272 1.190955 3.2393976 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 46.6 0.00229   NR MDB4808113.1 2026799 g52848 i0 47.9 0.529411764705882 48 25 52.9 0 146 3 28 75 MDB4808113.1 ankyrin repeat domain-containing protein [Verrucomicrobiota bacterium] diamond 144 46.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29083380 29083380 PRJNA685607_P_NODE_23768_length_355_cov_1.007092_g23409_i0 PRJNA685607 23768 355 1.007092 3.5751766 Bacteria 2 Bacteria Bacteria 69.3 6.32e-11   NR MEC7863212.1 2026799 g23409 i0 43 5.52676056338028 93 44 78.6 2 56 334 374 457 MEC7863212.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Verrucomicrobiota bacterium] diamond 1962 69.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29292690 29292690 PRJNA685607_P_NODE_69509_length_250_cov_0.870056_g69150_i0 PRJNA685607 69509 250 0.870056 2.17514 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 84.7 3.68e-18   NR MES2696275.1 2026799 g69150 i0 90 1.2 50 5 60 0 1 150 148 197 MES2696275.1 dephospho-CoA kinase [Verrucomicrobiota bacterium] diamond 300 84.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30145114 30145114 PRJNA685607_P_NODE_95192_length_241_cov_0.916667_g94833_i0 PRJNA685607 95192 241 0.916667 2.20916747 Candidatus Didemnitutus sp. 2814259 Bacteria Bacteria 146 4.2e-39   NR MDP2137738.1 2814259 g94833 i0 96.2 0.983402489626556 79 3 98.3 0 3 239 414 492 MDP2137738.1 hypothetical protein [Candidatus Didemnitutus sp.] diamond 237 146 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Candidatus Didemnitutus Candidatus Didemnitutus sp.
30714090 30714090 PRJNA685607_P_NODE_74154_length_248_cov_0.880000_g73795_i0 PRJNA685607 74154 248 0.88 2.1824 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 137 2.87e-38   NR MES2465814.1 2026799 g73795 i0 82.9 0.991935483870968 82 14 99.2 0 246 1 87 168 MES2465814.1 YdjY domain-containing protein [Verrucomicrobiota bacterium] diamond 246 137 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30935407 30935407 PRJNA685607_P_NODE_80534_length_246_cov_0.890173_g80175_i0 PRJNA685607 80534 246 0.890173 2.18982558 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 112 7.260000000000001e-27   NR HMP82534.1 2026799 g80175 i0 63 1.97560975609756 81 29 97.6 1 2 241 149 229 HMP82534.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 486 112 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31156135 31156135 PRJNA685607_P_NODE_24875_length_350_cov_0.981949_g24516_i0 PRJNA685607 24875 350 0.981949 3.4368215 Opitutaceae bacterium 2006848 Bacteria Bacteria 55.5 4.27e-6   NR MDO8544325.1 2006848 g24516 i0 38.1 0.54 63 37 54 1 344 156 203 263 MDO8544325.1 PRC-barrel domain-containing protein [Opitutaceae bacterium] diamond 189 55.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31219330 31219330 PRJNA685607_P_NODE_95395_length_241_cov_0.916667_g95036_i0 PRJNA685607 95395 241 0.916667 2.20916747 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 118 6.91e-30   NR MBS0648370.1 2026799 g95036 i0 65 0.995850622406639 80 28 99.6 0 241 2 219 298 MBS0648370.1 pesticidal protein Cry15Aa [Verrucomicrobiota bacterium] diamond 240 118 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31282838 31282838 PRJNA685607_P_NODE_48455_length_281_cov_1.475962_g48096_i0 PRJNA685607 48455 281 1.475962 4.14745322 Prosthecobacter dejongeii 48465 Bacteria Bacteria 52.4 2.29e-5   NR WP_184211924.1 48465 g48096 i0 47.3 0.587188612099644 55 28 58.7 1 117 281 244 297 WP_184211924.1 FAD-binding domain-containing protein [Prosthecobacter dejongeii] diamond 165 52.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter dejongeii
31567847 31567847 PRJNA685607_P_NODE_78596_length_247_cov_0.885057_g78237_i0 PRJNA685607 78596 247 0.885057 2.18609079 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 108 3.2300000000000003e-27   NR HZJ15627.1 2811408 g78237 i0 73.3 0.910931174089069 75 19 91.1 1 23 247 2 75 HZJ15627.1 sigma-70 family RNA polymerase sigma factor [Chthoniobacteraceae bacterium] diamond 225 108 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
31788792 31788792 PRJNA685607_P_NODE_81277_length_246_cov_0.890173_g80918_i0 PRJNA685607 81277 246 0.890173 2.18982558 Luteolibacter sp. SL25 1962973 Bacteria Bacteria 127 6.329999999999999e-32   NR WP_267674639.1 2995170 g80918 i0 75.3 1.97560975609756 81 20 98.8 0 2 244 364 444 WP_267674639.1 AsmA-like C-terminal region-containing protein [Luteolibacter sp. SL250] diamond 486 127 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. SL250
32465180 32465180 PRJNA685607_P_NODE_96839_length_241_cov_0.916667_g96480_i0 PRJNA685607 96839 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 121 3.69e-33   NR MBM3869666.1 2026799 g96480 i0 70.5 6.82157676348548 78 23 97.1 0 2 235 27 104 MBM3869666.1 phosphoribosyl-AMP cyclohydrolase [Verrucomicrobiota bacterium] diamond 1644 121 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32580149 32580149 PRJNA685607_P_NODE_41419_length_297_cov_0.959821_g41060_i0 PRJNA685607 41419 297 0.959821 2.85066837 Haloferula helveola 490095 Bacteria Bacteria 58.9 1.5e-7   NR WP_338686615.1 490095 g41060 i0 34.8 1.70707070707071 92 58 90.9 1 19 288 748 839 WP_338686615.1 RICIN domain-containing protein [Haloferula helveola] diamond 507 58.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Haloferula Haloferula helveola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;