RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA685607" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA685607 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4494225 4494225 PRJNA685607_P_NODE_3924_length_786_cov_3.286115_g3612_i0 PRJNA685607 3924 786 3.286115 25.8288639 Rozella allomycis CSF55 988480 Fungi Fungi 361 2.8e-123   NR EPZ32691.1 988480 g3612 i0 65 10.6603053435114 257 90 98.1 0 772 2 1 257 EPZ32691.1 40S ribosomal protein S4 [Rozella allomycis CSF55] diamond 8379 361 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30145104 30145104 PRJNA685607_P_NODE_26752_length_342_cov_1.144981_g26393_i0 PRJNA685607 26752 342 1.144981 3.91583502 Rozella allomycis CSF55 988480 Fungi Fungi 99.8 1.03e-21   NR EPZ32047.1 988480 g26393 i0 48 2.64912280701754 102 53 89.5 0 29 334 10 111 EPZ32047.1 Tetratricopeptide-like helical domain-containing protein [Rozella allomycis CSF55] diamond 906 99.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;