RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where bioproject = "PRJNA685607" and tax_phylum = "Candidatus Undinarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Undinarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA685607 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24892437 24892437 PRJNA685607_P_NODE_46380_length_285_cov_2.188679_g46021_i0 PRJNA685607 46380 285 2.188679 6.23773515 Candidatus Naiadarchaeum limnaeum 2756139 Archaea Archaea 80.1 2.47e-16   NR HIK00950.1 2756139 g46021 i0 52.1 3.61052631578947 71 34 74.7 0 30 242 70 140 HIK00950.1 30S ribosomal protein S19e [Candidatus Naiadarchaeum limnaeum] diamond 1029 80.1 1 Archaea   Nanobdellati Candidatus Undinarchaeota Candidatus Undinarchaeia Candidatus Naiadarchaeales Candidatus Naiadarchaeaceae Candidatus Naiadarchaeum Candidatus Naiadarchaeum limnaeum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;