RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA685607", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA685607 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18518377 18518377 PRJNA685607_P_NODE_35635_length_312_cov_1.288703_g35276_i0 PRJNA685607 35635 312 1.288703 4.02075336 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 124 6.09e-24   NTclustered gi|294933094|ref|XM_002780549.1| 423536 g35276 i0 79.885 2.50641025641026 174 31 55 4 141 312 594 423 Perkinsus marinus ATCC 50983 40S ribosomal protein S5, putative, mRNA blastn 782 124 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
28704548 28704548 PRJNA685607_P_NODE_34747_length_315_cov_0.954545_g34388_i0 PRJNA685607 34747 315 0.954545 3.00681675 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 147 7.65e-40   NR KAF4671046.1 32597 g34388 i0 65.7 5.96190476190476 105 35 99 1 2 313 178 282 KAF4671046.1 hypothetical protein FOZ61_006864 [Perkinsus olseni] diamond 1878 147 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;