RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA685607", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA685607 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7553986 7553986 PRJNA685607_P_NODE_10286_length_487_cov_1.072464_g9930_i0 PRJNA685607 10286 487 1.072464 5.22289968 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 153 2.399999999999999e-41   NR ETO09453.1 46433 g9930 i0 66.9 0.726899383983573 118 36 72.7 2 485 132 208 322 ETO09453.1 hypothetical protein RFI_27925 [Reticulomyxa filosa] diamond 354 153 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31314560 31314560 PRJNA685607_P_NODE_67375_length_250_cov_1.474576_g67016_i0 PRJNA685607 67375 250 1.474576 3.68644 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 55.8 9.73e-7   NR ETO24400.1 46433 g67016 i0 44.2 1.176 52 23 62.4 1 195 40 11 56 ETO24400.1 lysosomal carboxypeptidase [Reticulomyxa filosa] diamond 294 55.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;