RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA685607", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA685607 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27651022 27651022 PRJNA685607_P_NODE_71884_length_249_cov_0.875000_g71525_i0 PRJNA685607 71884 249 0.875 2.17875 Minisyncoccota bacterium 2053589 Bacteria Bacteria 52.8 1.17e-5   NR HEY1041389.1 2053589 g71525 i0 41.3 1.4578313253012 46 27 55.4 0 220 83 224 269 HEY1041389.1 Ig-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 363 52.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32705764 32705764 PRJNA685607_P_NODE_81180_length_246_cov_0.890173_g80821_i0 PRJNA685607 81180 246 0.890173 2.18982558 Minisyncoccota bacterium 2053589 Bacteria Bacteria 57 3.68e-7   NR MEZ0208986.1 2053589 g80821 i0 40.5 1.02439024390244 84 46 98.8 3 2 244 1167 1249 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 252 57 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;