RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA685607", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Schekmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Schekmaniibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA685607 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31662321 31662321 PRJNA685607_P_NODE_62577_length_255_cov_1.093407_g62218_i0 PRJNA685607 62577 255 1.093407 2.78818785 Candidatus Schekmanbacteria bacterium 2419984 Bacteria Bacteria 68.9 4.54e-12   NR MBI2571365.1 2419984 g62218 i0 45.8 0.976470588235294 83 40 97.6 2 255 7 64 141 MBI2571365.1 TerD family protein [Candidatus Schekmanbacteria bacterium] diamond 249 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;