RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA685607", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA685607 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31061947 31061947 PRJNA685607_P_NODE_6255_length_615_cov_1.418819_g5909_i0 PRJNA685607 6255 615 1.418819 8.72573685 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 68.9 2.64e-10   NR HSW76902.1 2973664 g5909 i0 48.1 0.385365853658537 79 37 38.5 2 184 420 136 210 HSW76902.1 histone H1/H5 family protein [Candidatus Saccharimonadales bacterium] diamond 237 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31294461 31294461 PRJNA685607_P_NODE_45675_length_287_cov_1.144860_g45316_i0 PRJNA685607 45675 287 1.14486 3.2857482 Candidatus Saccharimonas 1331051 Bacteria Bacteria 121 1.66e-29   NR MBP6037787.1 1917697 g45316 i0 60 1.90243902439024 95 38 99.3 0 1 285 338 432 MBP6037787.1 hypothetical protein [Candidatus Saccharimonas sp.] diamond 546 122 0.991803278688525 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
32580156 32580156 PRJNA685607_P_NODE_84639_length_245_cov_0.895349_g84280_i0 PRJNA685607 84639 245 0.895349 2.19360505 Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_ 1802133 Bacteria Bacteria 87.4 6.96e-18   NR OGL23466.1 1802133 g84280 i0 51.3 0.955102040816327 78 38 95.5 0 4 237 325 402 OGL23466.1 MAG: hypothetical protein A2791_01295 [Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30] diamond 234 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;