RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA685607", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA685607 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27871852 27871852 PRJNA685607_P_NODE_3485_length_840_cov_1.585398_g3186_i0 PRJNA685607 3485 840 1.585398 13.3173432 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 175 2.07e-45   NR HWX21912.1 2838779 g3186 i0 43.2 0.917857142857143 257 130 87.9 6 838 101 448 699 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 771 175 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30903789 30903789 PRJNA685607_P_NODE_5234_length_675_cov_2.149502_g4895_i0 PRJNA685607 5234 675 2.149502 14.5091385 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 131 6.0000000000000005e-31   NR HWX21912.1 2838779 g4895 i0 44 2.53777777777778 191 96 80.9 5 553 8 503 691 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 1713 131 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32894664 32894664 PRJNA685607_P_NODE_4200_length_761_cov_1.680233_g3881_i0 PRJNA685607 4200 761 1.680233 12.78657313 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 120 5.8700000000000005e-27   NR HWX21912.1 2838779 g3881 i0 44.3 0.729303547963206 185 94 70.2 4 551 18 517 699 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 555 120 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;