RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA685060" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA685060 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29292684 29292684 PRJNA685060_P_NODE_9429_length_309_cov_1.169492_g9339_i0 PRJNA685060 9429 309 1.169492 3.61373028 Smittium megazygosporum 133381 Fungi Fungi 63.9 1.4e-9   NR PVU86568.1 133381 g9339 i0 47.5 0.592233009708738 61 32 59.2 0 125 307 4 64 PVU86568.1 hypothetical protein BB560_006662 [Smittium megazygosporum] diamond 183 63.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium megazygosporum
31788779 31788779 PRJNA685060_P_NODE_5957_length_393_cov_1.531250_g5867_i0 PRJNA685060 5957 393 1.53125 6.0178125 Coemansia erecta 147472 Fungi Fungi 45.8 0.0132   NR KAJ1720167.1 147472 g5867 i0 33.3 0.595419847328244 78 49 57.3 2 120 344 121 198 KAJ1720167.1 hypothetical protein LPJ53_005171 [Coemansia erecta] diamond 234 45.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia erecta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;