contig_metadata
15 rows where bioproject = "PRJNA685060" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13930041 | 13930041 | PRJNA685060_P_NODE_6711_length_368_cov_1.044068_g6621_i0 | PRJNA685060 | 6711 | 368 | 1.044068 | 3.84217024 | Paludibacter | 346096 | Bacteria | Bacteria | 158 | 7.2e-34 | NTclustered | gi|470487156|ref|NR_076804.1| | 185300 | g6621 | i0 | 84.906 | 7.28804347826087 | 159 | 20 | 43 | 4 | 211 | 367 | 869 | 713 | Paludibacter propionicigenes strain WB4 23S ribosomal RNA gene, complete sequence | blastn | 2682 | 158 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Paludibacteraceae | Paludibacter | Paludibacter propionicigenes | |
| 15968840 | 15968840 | PRJNA685060_P_NODE_15973_length_245_cov_0.895349_g15883_i0 | PRJNA685060 | 15973 | 245 | 0.895349 | 2.19360505 | Adhaeribacter swui | 2086471 | Bacteria | Bacteria | 281 | 2.59e-71 | NTclustered | gi|1891112286|gb|CP055156.1| | 2086471 | g15883 | i0 | 87.449 | 1.00816326530612 | 247 | 27 | 100 | 4 | 1 | 245 | 1706545 | 1706301 | Adhaeribacter swui strain KCTC 52873 chromosome, complete genome | blastn | 247 | 281 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Adhaeribacter | Adhaeribacter swui | |
| 19793103 | 19793103 | PRJNA685060_P_NODE_15456_length_246_cov_0.890173_g15366_i0 | PRJNA685060 | 15456 | 246 | 0.890173 | 2.18982558 | Hymenobacter sublimis | 2933777 | Bacteria | Bacteria | 311 | 3.32e-80 | NTclustered | gi|2230260579|gb|CP095848.1| | 2933777 | g15366 | i0 | 89.431 | 4.45934959349593 | 246 | 26 | 100 | 0 | 1 | 246 | 3535683 | 3535928 | Hymenobacter sublimis strain 5516 S-25 chromosome, complete genome | blastn | 1097 | 311 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter sublimis | |
| 21578255 | 21578255 | PRJNA685060_P_NODE_15597_length_246_cov_0.890173_g15507_i0 | PRJNA685060 | 15597 | 246 | 0.890173 | 2.18982558 | Flavobacterium | 237 | Bacteria | Bacteria | 433 | 6.79e-117 | NTclustered | gi|1145600863|gb|KX832991.2| | 239 | g15507 | i0 | 98.374 | 99.5650406504065 | 246 | 4 | 100 | 0 | 1 | 246 | 492 | 737 | Flavobacterium sp. strain 2PKS3051 16S ribosomal RNA gene, partial sequence | blastn | 24493 | 433 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. | |
| 23618995 | 23618995 | PRJNA685060_P_NODE_13499_length_251_cov_0.865169_g13409_i0 | PRJNA685060 | 13499 | 251 | 0.865169 | 2.17157419 | Chryseobacterium shandongense | 1493872 | Bacteria | Bacteria | 222 | 1.64e-53 | NTclustered | gi|1519499628|gb|CP033914.1| | 1493872 | g13409 | i0 | 84.322 | 2.8207171314741 | 236 | 28 | 91 | 6 | 23 | 251 | 1633660 | 1633427 | Chryseobacterium shandongense strain G0239 chromosome, complete genome | blastn | 708 | 222 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium shandongense | |
| 24128047 | 24128047 | PRJNA685060_P_NODE_9339_length_310_cov_1.729958_g9249_i0 | PRJNA685060 | 9339 | 310 | 1.729958 | 5.3628698 | Haliscomenobacter | 2349 | Bacteria | Bacteria | 379 | 1.17e-100 | NTclustered | gi|470488547|ref|NR_076877.1| | 2350 | g9249 | i0 | 88.782 | 415.896774193548 | 312 | 31 | 100 | 4 | 1 | 310 | 345 | 654 | Haliscomenobacter hydrossis strain DSM 1100 23S ribosomal RNA gene, complete sequence | blastn | 128928 | 379 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Saprospiria | Saprospirales | Haliscomenobacteraceae | Haliscomenobacter | Haliscomenobacter hydrossis | |
| 27366962 | 27366962 | PRJNA685060_P_NODE_543_length_1223_cov_3.296522_g500_i0 | PRJNA685060 | 543 | 1223 | 3.296522 | 40.31646406 | Candidatus Latescibacterota bacterium | 2053570 | Bacteria | Bacteria | 49.3 | 0.0174 | NR | MEE2753403.1 | 2053570 | g500 | i0 | 34.8 | 0.218315617334424 | 89 | 53 | 21.1 | 3 | 86 | 343 | 72 | 158 | MEE2753403.1 hypothetical protein [Candidatus Latescibacterota bacterium] | diamond | 267 | 49.3 | 1 | Bacteria | FCB group | Pseudomonadati | Candidatus Latescibacterota | Candidatus Latescibacterota bacterium | |||||
| 27410111 | 27410111 | PRJNA685060_P_NODE_5783_length_400_cov_0.941896_g5693_i0 | PRJNA685060 | 5783 | 400 | 0.941896 | 3.767584 | Bacteria | 2 | Bacteria | Bacteria | 45.8 | 0.00421 | NR | MBC7826799.1 | 1869212 | g5693 | i0 | 30.8 | 6.3825 | 91 | 47 | 56.3 | 2 | 83 | 307 | 15 | 105 | MBC7826799.1 SET domain-containing protein-lysine N-methyltransferase [Chitinophagaceae bacterium] | diamond | 2553 | 45.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 27871833 | 27871833 | PRJNA685060_P_NODE_13265_length_251_cov_1.730337_g13175_i0 | PRJNA685060 | 13265 | 251 | 1.730337 | 4.34314587 | Altibacter sp. | 2024823 | Bacteria | Bacteria | 42.4 | 0.0438 | NR | WP_290785504.1 | 2024823 | g13175 | i0 | 41.2 | 0.609561752988048 | 51 | 29 | 59.8 | 1 | 78 | 227 | 19 | 69 | WP_290785504.1 IMPACT family protein [Altibacter sp.] | diamond | 153 | 42.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Altibacter | Altibacter sp. | |
| 28483451 | 28483451 | PRJNA685060_P_NODE_9306_length_311_cov_1.033613_g9216_i0 | PRJNA685060 | 9306 | 311 | 1.033613 | 3.21453643 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 99.8 | 1.86e-22 | NR | BCX00657.1 | 1898104 | g9216 | i0 | 49.5 | 2.60450160771704 | 91 | 41 | 83 | 1 | 310 | 53 | 252 | 342 | BCX00657.1 MAG: hypothetical protein KatS3mg041_0703 [Bacteroidota bacterium] | diamond | 810 | 100 | 0.998 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 28913577 | 28913577 | PRJNA685060_P_NODE_15108_length_247_cov_0.885057_g15018_i0 | PRJNA685060 | 15108 | 247 | 0.885057 | 2.18609079 | Pedobacter aquatilis | 351343 | Bacteria | Bacteria | 84 | 1.11e-16 | NR | WP_316739711.1 | 351343 | g15018 | i0 | 87.8 | 0.497975708502024 | 41 | 5 | 49.8 | 0 | 3 | 125 | 456 | 496 | WP_316739711.1 RagB/SusD family nutrient uptake outer membrane protein [Pedobacter aquatilis] | diamond | 123 | 84 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter aquatilis | |
| 31030321 | 31030321 | PRJNA685060_P_NODE_13655_length_250_cov_2.372881_g13565_i0 | PRJNA685060 | 13655 | 250 | 2.372881 | 5.9322025 | Chitinophagales bacterium | 2448779 | Bacteria | Bacteria | 45.1 | 0.00484 | NR | MFK7907468.1 | 2448779 | g13565 | i0 | 45.7 | 1.296 | 46 | 20 | 55.2 | 1 | 25 | 162 | 26 | 66 | MFK7907468.1 calcium-binding EGF-like domain-containing protein [Chitinophagales bacterium] | diamond | 324 | 45.1 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagales bacterium | |||
| 31219303 | 31219303 | PRJNA685060_P_NODE_17135_length_242_cov_0.911243_g17045_i0 | PRJNA685060 | 17135 | 242 | 0.911243 | 2.20520806 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 57 | 3.22e-7 | NR | HPT10631.1 | 2030927 | g17045 | i0 | 45 | 0.743801652892562 | 60 | 28 | 73.1 | 2 | 235 | 59 | 190 | 245 | HPT10631.1 NAD-dependent epimerase/dehydratase family protein [Bacteroidales bacterium] | diamond | 180 | 57 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 32042135 | 32042135 | PRJNA685060_P_NODE_8418_length_327_cov_2.641732_g8328_i0 | PRJNA685060 | 8418 | 327 | 2.641732 | 8.63846364 | Chitinophagaceae bacterium | 1869212 | Bacteria | Bacteria | 44.3 | 0.0292 | NR | HET9055784.1 | 1869212 | g8328 | i0 | 32.4 | 0.678899082568807 | 74 | 48 | 67 | 2 | 93 | 311 | 398 | 470 | HET9055784.1 alpha-2-macroglobulin family protein [Chitinophagaceae bacterium] | diamond | 222 | 44.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 32674179 | 32674179 | PRJNA685060_P_NODE_13360_length_251_cov_0.865169_g13270_i0 | PRJNA685060 | 13360 | 251 | 0.865169 | 2.17157419 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 116 | 1.4599999999999999e-31 | NR | MFN7821604.1 | 1898104 | g13270 | i0 | 74.7 | 0.99203187250996006 | 83 | 21 | 99.2 | 0 | 1 | 249 | 15 | 97 | MFN7821604.1 F0F1 ATP synthase subunit A [Bacteroidota bacterium] | diamond | 249 | 116 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;