RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA683902" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA683902 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30788904 30788904 PRJNA683902_S_NODE_16414_length_282_cov_1.379592_g15970_i0 PRJNA683902 16414 282 1.379592 3.89044944 Brachionus 10194 Rotifera other_Eukaryota 44.7 0.00295   NR CAF0732704.1 104777 g15970 i0 35.1 2.92553191489362 74 47 77.7 1 219 1 26 99 CAF0732704.1 unnamed protein product [Brachionus calyciflorus] diamond 825 44.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
31832001 31832001 PRJNA683902_S_NODE_27737_length_188_cov_2.245033_g27293_i0 PRJNA683902 27737 188 2.245033 4.22066204 Brachionus 10194 Rotifera other_Eukaryota 44.3 0.00512   NR AFP72938.1 183144 g27293 i0 61.8 7.81914893617021 34 13 54.3 0 172 71 400 433 AFP72938.1 mate recognition protein motif repeat B, partial [Brachionus sp. Tiscar] diamond 1470 44.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus sp. Tiscar
32137093 32137093 PRJNA683902_S_NODE_16238_length_285_cov_1.584677_g15794_i0 PRJNA683902 16238 285 1.584677 4.51632945 Adineta ricciae 249248 Rotifera other_Eukaryota 103 2.33e-24   NR CAF1646217.1 249248 g15794 i0 72.1 3.57894736842105 68 19 71.6 0 285 82 87 154 CAF1646217.1 unnamed protein product, partial [Adineta ricciae] diamond 1020 103 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;