RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA683902", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Preplasmiviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA683902 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6279424 6279424 PRJNA683902_S_NODE_24705_length_204_cov_6.059880_g24261_i0 PRJNA683902 24705 204 6.05988 12.3621552 root 1 Root_unresolved Root_unresolved 368 1.56e-97   NTclustered gi|2620236085|gb|OR777220.1| 10515 g24261 i0 100 97.5490196078431 199 0 98 0 1 199 15025 15223 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 19900 368 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11378932 11378932 PRJNA683902_S_NODE_23769_length_210_cov_2.167630_g23325_i0 PRJNA683902 23769 210 2.16763 4.552023 root 1 Root_unresolved Root_unresolved 388 1.24e-103   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g23325 i0 100 100 210 0 100 0 1 210 11473 11264 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 21000 388 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12654672 12654672 PRJNA683902_S_NODE_18310_length_256_cov_4.534247_g17866_i0 PRJNA683902 18310 256 4.534247 11.60767232 root 1 Root_unresolved Root_unresolved 311 3.4800000000000004e-80   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g17866 i0 99.419 98.39453125 172 0 98 1 86 256 11646 11475 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 25189 311 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12655059 12655059 PRJNA683902_S_NODE_35170_length_161_cov_4.387097_g34726_i0 PRJNA683902 35170 161 4.387097 7.06322617 root 1 Root_unresolved Root_unresolved 276 7.29e-70   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g34726 i0 100 92.5465838509317 149 0 93 0 6 154 14877 15025 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14900 276 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;